| .. |
|
3D-ICE
|
5149d3f60b
academic/3D-ICE: Added (Thermal Emulator Library).
|
2 years ago |
|
AlphaPlot
|
f0ed45b6d9
academic/AlphaPlot: Added (data analysis and visualization)
|
2 years ago |
|
CAFS_divergence
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
CAPS_coevolution
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
DRAMPower
|
fd7d20a5ad
academic/DRAMPower: Fix github tarball handling.
|
2 years ago |
|
DRAMSim2
|
9e2c15d7ba
academic/DRAMSim2: Added (A cycle accurate DRAM simulator)
|
2 years ago |
|
DRAMSys
|
bccbfdcbc6
academic/DRAMSys: Fix github tarball handling.
|
1 year ago |
|
DRAMsim3
|
95f73609d5
academic/DRAMsim3: Fix github tarball handling.
|
2 years ago |
|
Data2FCS
|
e54fb7e6bd
academic/Data2FCS: Use zulu-openjdk11.
|
2 years ago |
|
DendroPy
|
01f1d2279a
academic/DendroPy: Updated for version 4.5.1.
|
2 years ago |
|
EMBASSY
|
fe51eaf70f
academic/EMBASSY: Update binaries location.
|
2 years ago |
|
EMBOSS
|
32bfc419eb
academic/EMBOSS: Update binaries location.
|
2 years ago |
|
FCSalyzer
|
f2572885a8
academic/FCSalyzer: Handle url-encoded filenames.
|
2 years ago |
|
FreeFem
|
d70330fd59
academic/FreeFem: Updated for version 4.12.
|
1 year ago |
|
Gabedit
|
2da024b26e
academic/Gabedit: Install references.
|
2 years ago |
|
Gblocks
|
248ad7bb1b
academic/Gblocks: Fix download.
|
2 years ago |
|
GeoGebra
|
9e0ffddb9b
academic/GeoGebra: Use zulu-openjdk7.
|
2 years ago |
|
Gridcoin-Research
|
4e1325ead8
academic/Gridcoin-Research: fix md5sum
|
2 years ago |
|
HMMER
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
IGV
|
15779baf69
academic/IGV: Updated for version 2.14.1.
|
2 years ago |
|
ITK
|
77fcf64581
academic/ITK: Update the internal patch for gcc 11.x.
|
3 years ago |
|
Kst
|
c3bdf602e0
academic/Kst: Updated for version 20221025_5fdd819.
|
1 year ago |
|
MetaPhlAn2
|
b775f3e2b9
academic/MetaPhlAn2: Fix ARCH and deps.
|
2 years ago |
|
NWChem
|
4e895261ac
academic/NWChem: Added (High-Performance Computational Chemistry)
|
2 years ago |
|
OpenFOAM
|
103e41bdab
academic/OpenFOAM: Updated for version 10.
|
2 years ago |
|
OpenMM
|
2835dbd259
academic/OpenMM: Fix github tarball handling.
|
2 years ago |
|
OpenVSP
|
6c0630ab45
academic/OpenVSP: Moved from graphics. Updated for version 3.31.1.
|
1 year ago |
|
PhyML
|
08e0e1dd1b
academic/PhyML: Updated for version 3.3.20220408.
|
2 years ago |
|
PyAMG
|
72a20a0b0e
academic/PyAMG: Fix deps.
|
2 years ago |
|
R
|
61d35fd706
academic/R: Updated for version 4.2.2.
|
2 years ago |
|
RAxML
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
RepeatMasker
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
STAR
|
b8f68ec788
academic/STAR: ugraded to version 2.7.10b
|
2 years ago |
|
SU2
|
2736a4b96f
academic/SU2: Mark as 64-bit only.
|
2 years ago |
|
SeqMonk
|
8080275b2e
academic/SeqMonk: Updated for version 1.48.1.
|
2 years ago |
|
Shark
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
SimEng
|
ef8e6a516c
academic/SimEng: Fix github tarball handling.
|
2 years ago |
|
TreeGraph
|
7156a393b2
academic/TreeGraph: Use zulu-openjdk11.
|
2 years ago |
|
ViennaRNA
|
da7daf6316
academic/ViennaRNA: Fix build.
|
1 year ago |
|
WEVOTE
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
WolframEngine
|
8d0f03e08e
academic/WolframEngine: Updated for version 13.2.0.
|
1 year ago |
|
WordNet
|
e4681731c7
academic/WordNet: Change i486 to i586
|
2 years ago |
|
ZeGrapher
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
abntex
|
b5a7a95bdf
academic/abntex: Updated for version 20200715_f0a4d3c.
|
2 years ago |
|
aenig4
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
aeskulap
|
cc29a209cd
academic/aeskulap: Fix shebang.
|
2 years ago |
|
aline
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
aliview
|
439933c3a8
academic/aliview: Updated for version 1.28.
|
2 years ago |
|
amd
|
7368603bd0
academic/amd: Change i486 to i586
|
2 years ago |
|
amplicon
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
amplifx
|
3e2abd5130
academic/amplifx: Fix download URL.
|
2 years ago |
|
antiprism
|
5df1225452
academic/antiprism: Change i486 to i586
|
2 years ago |
|
archaeopteryx
|
68e8bf980d
academic/archaeopteryx: Use zulu-openjdk11.
|
2 years ago |
|
aris
|
ad694a3d5c
academic/aris: New maintainer. Update patch.
|
2 years ago |
|
arka
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
armadillo
|
060c98ed32
academic/armadillo: Fix download URL, doc dir.
|
2 years ago |
|
arpack
|
44c1b477bc
academic/arpack: Change i486 to i586
|
2 years ago |
|
arpack-ng
|
35f2e2c10e
academic/arpack-ng: Change i486 to i586
|
2 years ago |
|
artha
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
avl
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
avogadroapp
|
6aec6d2a31
academic/avogadroapp: Updated for version 1.97.0.
|
2 years ago |
|
avogadrolibs
|
f7ea463738
academic/avogadrolibs: Patched to fix cmake errors.
|
1 year ago |
|
bcftools
|
ee794abc00
academic/bcftools: Upgrade to version 1.16
|
2 years ago |
|
bedGraphToBigWig
|
646e5d49f7
academic/bedGraphToBigWig: Strip binary.
|
2 years ago |
|
bedtools
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
biblesync
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
bibletime
|
7c9d2a6dc9
academic/bibletime: Update email address.
|
2 years ago |
|
bibus
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
biopython
|
3b81dfb39b
academic/biopython: Fix deps.
|
2 years ago |
|
boinc
|
955fd36c35
academic/boinc: Updated for version 7.20.5
|
2 years ago |
|
bowtie
|
102a4ff0e0
academic/bowtie: Updated for version 1.3.1.
|
2 years ago |
|
bowtie2
|
5243543eb4
academic/bowtie2: ugraded to version 2.5.0
|
2 years ago |
|
bowtie2-legacy
|
8a65ad3b95
academic/bowtie2-legacy: Patch source.
|
2 years ago |
|
bpp-core
|
3e7d06cc98
academic/bpp-core: Added (Bio++ Core Library)
|
2 years ago |
|
bpp-phyl
|
bebe8f68ff
academic/bpp-phyl: Added (Bio++ Phylogenetic Library)
|
2 years ago |
|
bpp-phyl-omics
|
036288dac7
academic/bpp-phyl-omics: Added (Bio++ Phylogenetic Omics Library)
|
2 years ago |
|
bpp-popgen
|
0b01583f8d
academic/bpp-popgen: Added (Bio++ Population Genetics Library)
|
2 years ago |
|
bpp-seq
|
fced1f8278
academic/bpp-seq: Added (Bio++ Sequence library)
|
2 years ago |
|
bpp-seq-omics
|
5788ac4910
academic/bpp-seq-omics: Added (Bio++ Sequence Omics Library)
|
2 years ago |
|
bpp1.9-numcalc
|
c295cde0be
academic/bpp1.9-numcalc: Added (Bio++ 1.9 NumCalc Library)
|
2 years ago |
|
bpp1.9-phyl
|
1f0ff62f35
academic/bpp1.9-phyl: Added (Bio++ 1.9 Phyl Library)
|
2 years ago |
|
bpp1.9-seq
|
15bcc39c2b
academic/bpp1.9-seq: Added (Bio++ 1.9 Seq Library)
|
2 years ago |
|
bpp1.9-utils
|
24b14de22b
academic/bpp1.9-utils: Added (Bio++ 1.9 Utils Library)
|
2 years ago |
|
bppsuite
|
2b4673188b
academic/bppsuite: Added (Bio++ program suite)
|
2 years ago |
|
btf
|
82417a708b
academic/btf: Change i486 to i586
|
2 years ago |
|
bwa
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
cadabra2
|
5696278d68
academic/cadabra2: Update README.
|
1 year ago |
|
calc
|
c03d41bf9b
academic/calc: Updated for version 2.14.0.14.
|
2 years ago |
|
calcoo
|
b2519f95fd
various: Use zulu jdk builds for REQUIRES.
|
2 years ago |
|
camd
|
df6d401e88
academic/camd: Change i486 to i586
|
2 years ago |
|
cap3
|
37361bb70c
academic/cap3: DOWLOAD updated.
|
2 years ago |
|
cblas
|
8aaada867a
academic/cblas: Updated for version 3.11.0
|
2 years ago |
|
ccolamd
|
cd24df0736
academic/ccolamd: Change i486 to i586
|
2 years ago |
|
cdo
|
bba133583a
academic/cdo: Updated for version 2.1.1.
|
2 years ago |
|
celestia
|
7c03d98cd8
academic/celestia: Wrap README at 72 columns.
|
2 years ago |
|
chartgeany
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
chemtool
|
934ec4aeeb
academic/chemtool: Fix build failure with gcc10.
|
2 years ago |
|
cholmod
|
d70c548d0e
academic/cholmod: Change i486 to i586
|
2 years ago |
|
cistrome-CEAS
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
cistrome-MACS
|
09577efff1
academic/cistrome-MACS: Handle content-disposition download.
|
2 years ago |
|
cistrome-conductGO
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
cistrome-extra
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
cistrome-mdseqpos
|
b1bcdf0d41
academic/cistrome-mdseqpos: Fix deps.
|
2 years ago |
|
clark-ugene
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
cld2
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
clustalo
|
de91160c94
academic/clustalo: Remove .la files.
|
2 years ago |
|
clustalw
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
clustalx
|
a574a11d9c
academic/clustalx: Updated to use qmake-qt5. BUILD bumped.
|
2 years ago |
|
colamd
|
14b9f4abf1
academic/colamd: Change i486 to i586
|
2 years ago |
|
colin
|
a146a1573a
academic/colin: Use qt4.
|
2 years ago |
|
convertall
|
307aa0c3ec
academic/convertall: Fix docs.
|
2 years ago |
|
copasi
|
270ea97f6e
academic/copasi: Updated for version 4.39.272.
|
1 year ago |
|
cryptominisat
|
1075dede68
academic/cryptominisat: Updated for version 5.11.3.
|
2 years ago |
|
csparse
|
a78e29c323
academic/csparse: Change i486 to i586
|
2 years ago |
|
cufflinks
|
551eaa9aa0
academic/cufflinks: Fix info file.
|
2 years ago |
|
cutadapt
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
cvc4
|
b2519f95fd
various: Use zulu jdk builds for REQUIRES.
|
2 years ago |
|
cxsparse
|
178fe5f1bb
academic/cxsparse: Change i486 to i586
|
2 years ago |
|
dakota
|
00a702a66e
academic/dakota: Updated for version 6.17.0.
|
1 year ago |
|
datamash
|
1178478af8
academic/datamash: Updated for version 1.8.
|
2 years ago |
|
diamond
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
dimod
|
4caa454e01
academic/dimod: Added (A shared API for samplers)
|
2 years ago |
|
ds9
|
1122933ad5
academic/ds9: Updated for version 8.4.1.
|
1 year ago |
|
dwave-cloud-client
|
9dfe339bc5
academic/dwave-cloud-client: Added (REST interface for D-Wave API)
|
2 years ago |
|
dwave-greedy
|
de25b7e854
academic/dwave-greedy: Added (steepest descent solver for (BQM))
|
2 years ago |
|
dwave-hybrid
|
656a399dad
academic/dwave-hybrid: Added (Hybrid Async Decomposition Sampler)
|
2 years ago |
|
dwave-inspector
|
eb737faa28
academic/dwave-inspector: Added (visualize D-Wave structured solver)
|
2 years ago |
|
dwave-neal
|
ce47b49a3c
academic/dwave-neal: Added (a simulated annealing sampler)
|
2 years ago |
|
dwave-networkx
|
4783e23c04
academic/dwave-networkx: Added (D-Wave Systems network exploration)
|
2 years ago |
|
dwave-ocean-sdk
|
ce37fe2f8b
academic/dwave-ocean-sdk: Fix deps.
|
2 years ago |
|
dwave-preprocessing
|
403e2641c9
academic/dwave-preprocessing: Added (binary quadratic models tools)
|
2 years ago |
|
dwave-system
|
373c2d6bed
academic/dwave-system: Added (basic API for D-Wave system)
|
2 years ago |
|
dwave-tabu
|
05e026d95a
academic/dwave-tabu: Added (C/C++ implementation of MST2 for QUBO)
|
2 years ago |
|
dwavebinarycsp
|
a0d7c69288
academic/dwavebinarycsp: Added (contruct binary quadratic models)
|
2 years ago |
|
easy_spice
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
ed-v6
|
5e711e27c5
academic/ed-v6: Fix github tarball handling.
|
2 years ago |
|
edsim51di
|
e34f1f4c49
academic/edsim51di: Update DOWNLOAD to https.
|
2 years ago |
|
elk
|
85fc134322
academic/elk: Fix SlackBuild permissions.
|
2 years ago |
|
engauge
|
3902b7f7dc
academic/engauge: Updated for version 12.1.
|
2 years ago |
|
ent
|
3edbe10213
academic/ent: Update email address.
|
2 years ago |
|
eprover
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
equalx
|
03e0fd07a2
academic/equalx: Update email address.
|
2 years ago |
|
ess
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
evopedia_qt
|
93e459def7
academic/evopedia_qt: Use qt4.
|
2 years ago |
|
exonerate
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
extrema
|
3a0f90799c
academic/extrema: Remove .la files.
|
2 years ago |
|
fann
|
d1e0a67bdc
academic/fann: Change i486 to i586
|
2 years ago |
|
fastqc
|
b2519f95fd
various: Use zulu jdk builds for REQUIRES.
|
2 years ago |
|
fet
|
041bf31302
academic/fet: Updated for version 6.8.7.
|
1 year ago |
|
fiji
|
843bc98ccd
academic/fiji: Updated for version 20220414_1745.
|
2 years ago |
|
finchtv
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
fityk
|
73cb335d3b
academic/fityk: Fix wxPython/wxGTK3 conflict.
|
2 years ago |
|
flann
|
20418956d7
academic/flann: Fix building with the newer cmake, cleanups.
|
2 years ago |
|
flexbar
|
86f0c20fe7
academic/flexbar: Update copyright year.
|
3 years ago |
|
free42
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
g3data
|
14c6c3de38
academic/g3data: Update github tarball handling.
|
2 years ago |
|
galculator
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
gaw3
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
gchemutils
|
383841a433
academic/gchemutils: Fix typo in script.
|
2 years ago |
|
gcompris-qt
|
9fa8b3132d
academic/gcompris-qt: Updated for version 3.1.
|
1 year ago |
|
geda-gaf
|
aa55f0fd65
academic/geda-gaf: Remove .la files.
|
2 years ago |
|
gelemental
|
e275de2863
academic/gelemental: Updated for version 2.0.1.
|
2 years ago |
|
gem5
|
24a9988076
academic/gem5: Added (open-source system-level & CPU simulator)
|
2 years ago |
|
geneconv
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
genius
|
127ca8ad0e
academic/genius: Updated for version 1.0.27.
|
2 years ago |
|
genometools
|
d47daef533
academic/genometools: Updated for version 1.6.2.
|
2 years ago |
|
genpak
|
a16c8489f3
academic/genpak: Fix docs.
|
2 years ago |
|
geomview
|
3a17c00937
academic/geomview: Updated for version 1.9.5.
|
1 year ago |
|
gerbv
|
5a9660a937
academic/gerbv: Remove .la files.
|
2 years ago |
|
getdp
|
53fbbc2bed
academic/getdp: Updated for version 3.5.0.
|
2 years ago |
|
getfem
|
5f234f25f1
academic/getfem: Fix deps.
|
2 years ago |
|
ggobi
|
9028ee796e
academic/ggobi: Updated for version 2.1.11.
|
2 years ago |
|
ghemical
|
9aa12d6689
academic/ghemical: Fix build.
|
2 years ago |
|
glpk
|
cc4063da93
academic/glpk: Remove .la files.
|
2 years ago |
|
glvis
|
aa5e8e80c8
academic/glvis: Added (finite element visualization tool).
|
2 years ago |
|
gmsh
|
795368a15f
academic/gmsh: Updated for version 4.11.1.
|
1 year ago |
|
gnucap
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
gp2fasta
|
1711592c3e
academic/gp2fasta: Change i486 to i586
|
2 years ago |
|
gpredict
|
c325377a99
academic/gpredict: revert to latest stable version 2.2.1
|
2 years ago |
|
grace
|
2218015806
academic/grace: Update download url.
|
2 years ago |
|
gresistor
|
cf4eb31d35
academic/gresistor: Change i486 to i586
|
2 years ago |
|
gretl
|
8a2c33bcfb
academic/gretl: Remove .la files.
|
2 years ago |
|
gri
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
gromacs
|
8e989a2f49
academic/gromacs: Minor template nitpick.
|
1 year ago |
|
grpn
|
533df169dd
academic/grpn: Change i486 to i586
|
2 years ago |
|
gspiceui
|
9ead0d88e0
academic/gspiceui: Depend on wxGTK3 instead of wxPython3
|
3 years ago |
|
gtkwave
|
2b8b9fb816
academic/gtkwave: Updated for version 3.3.111.
|
2 years ago |
|
gtypist
|
31343c084a
academic/gtypist: Updated maintainer info.
|
2 years ago |
|
gwyddion
|
03684c3edf
academic/gwyddion: Updated for version 2.62.
|
2 years ago |
|
h5utils
|
f56d846875
academic/h5utils: Updated for version 1.13.2.
|
1 year ago |
|
harminv
|
859cc74e6c
academic/harminv: Updated for version 1.4.2.
|
1 year ago |
|
hyphy
|
256f67c1af
academic/hyphy: Updated for version 2.5.42.
|
2 years ago |
|
iTest
|
a76195912a
academic/iTest: Use qt4.
|
2 years ago |
|
io_lib
|
d006776135
academic/io_lib: Remove .la files.
|
2 years ago |
|
iqtree
|
ea5fd4180b
academic/iqtree: Added (Efficient phylogenomic software by ML)
|
2 years ago |
|
irsim
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
isoelectric-point
|
7670cbff33
academic/isoelectric-point: Change i486 to i586
|
2 years ago |
|
itex2mml
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
jalview
|
5d475cee03
academic/jalview: Updated for version 2.11.2.4.
|
2 years ago |
|
jellyfish_k-mer
|
62106a0902
academic/jellyfish_k-mer: Remove .la files.
|
2 years ago |
|
jpicedt
|
08d2467b16
academic/jpicedt: Change i486 to i586
|
2 years ago |
|
jugglinglab
|
b2519f95fd
various: Use zulu jdk builds for REQUIRES.
|
2 years ago |
|
karma
|
c8bf9e2f2c
academic/karma: Allow ARCH=i586 in environment.
|
2 years ago |
|
klavaro
|
1ef35cbdef
academic/klavaro: Updated for version 3.14.
|
2 years ago |
|
klu
|
5b59b85569
academic/klu: Change i486 to i586
|
2 years ago |
|
knime
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
kraken
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
ktikz
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
kurso
|
cda60084cf
academic/kurso: x86 is unsupported.
|
2 years ago |
|
labplot2
|
2f80dd9b3d
academic/labplot2: Align with template.
|
1 year ago |
|
ladr
|
b060a08688
academic/ladr: Wrap README at 72 columns.
|
2 years ago |
|
laghos
|
0d7e16e39e
academic/laghos: Added (LAGrangian High-Order Solver)
|
2 years ago |
|
lalnview
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
lapack95
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
lapacke
|
9eb3cf61ac
academic/lapacke: Updated for version 3.11.0
|
2 years ago |
|
latex2html
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
ldl
|
f3ec309ae1
academic/ldl: Change i486 to i586
|
2 years ago |
|
libghemical
|
46499f1218
academic/libghemical: Change i486 to i586
|
2 years ago |
|
link-grammar
|
96e65d5a5c
academic/link-grammar: Change i486 to i586
|
2 years ago |
|
locarna
|
ad4abb8c8f
academic/locarna: Remove .la files.
|
2 years ago |
|
lpsolve
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
mafft
|
329edf7ded
academic/mafft: Updated for version 7.505.
|
2 years ago |
|
magic
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
mathics
|
3dec73f1a5
academic/mathics: Fix deps.
|
2 years ago |
|
mathjax2
|
0945fd5e57
academic/mathjax2: Fix github tarball handling.
|
2 years ago |
|
mathomatic
|
9d1ca68119
academic/mathomatic: Change i486 to i586
|
2 years ago |
|
matio
|
cabbb4adcd
academic/matio: Updated for version 1.5.23.
|
1 year ago |
|
maxima
|
6896fe235a
academic/maxima: Updated for version 5.46.0.
|
2 years ago |
|
meep
|
6ae6cda1fb
academic/meep: Updated for version 1.25.0.
|
1 year ago |
|
megax
|
8af6fec02f
academic/megax: Updated for version 11.0.11_1.
|
2 years ago |
|
meme-db-gomo
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
meme-db-motif
|
6074436888
academic/meme-db-motif: Updated for version 12.23.
|
2 years ago |
|
meme-db-tgene
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
meme-suite
|
555fc62ed6
academic/meme-suite: Updated for version 5.4.1.
|
2 years ago |
|
mendeleydesktop
|
770fec5a34
academic/mendeleydesktop: Change i486 to i586
|
2 years ago |
|
metalwalls
|
9d22daaaf0
academic/metalwalls: Added (Molecular modelling systems).
|
2 years ago |
|
metis
|
b8f92e22d2
academic/metis: Change i486 to i586
|
2 years ago |
|
mfem
|
14f6472d34
academic/mfem: Added (library for finite element methods).
|
2 years ago |
|
minorminer
|
3f50fb2245
academic/minorminer: Added (heuristic tool for minor embedding).
|
2 years ago |
|
mkDSSP
|
096ed059c3
academic/mkDSSP: Updated for version 4.0.3, switch to cmake.
|
2 years ago |
|
molequeue
|
15c596ee45
academic/molequeue: Updated for version 0.9.0.
|
2 years ago |
|
mpb
|
c19deca1fd
academic/mpb: Remove .la files.
|
2 years ago |
|
mrbayes
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
mumsa
|
7a410e6a80
academic/mumsa: Added (A tool to assess MSA quality)
|
2 years ago |
|
muscle
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
muscle5
|
1f43c07f3c
academic/muscle5: Added (MUSCLE 5: Next-generation MUSCLE)
|
2 years ago |
|
ncbi-blast
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
ncbi-blast+
|
a92f127be2
academic/ncbi-blast+: Updated for version 2.13.0.
|
2 years ago |
|
ncbi-rmblastn
|
de0652471d
academic/ncbi-rmblastn: Allow ARCH=i586 in environment.
|
2 years ago |
|
nco
|
640ca7d5e7
academic/nco: Updated for version 5.1.4.
|
1 year ago |
|
ncview
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
ngspice
|
4e816bd48b
academic/ngspice: Updated for version 39.
|
1 year ago |
|
novocraft
|
725dedd236
academic/novocraft: files update.
|
3 years ago |
|
octave
|
b33868f185
academic/octave: Updated for version 7.3.0
|
2 years ago |
|
openboard
|
7b49360918
academic/openboard: Fix build with newer ffmpeg.
|
2 years ago |
|
pal2nal
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
paml
|
094b36db14
academic/paml: Remove stray symlink.
|
2 years ago |
|
pamlX
|
08a2f00cc0
academic/pamlX: Rebuild for paml update.
|
2 years ago |
|
papi
|
c57341cd98
academic/papi: Updated for version 6.0.0.1.
|
2 years ago |
|
pari
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
parmetis
|
94894abf96
academic/parmetis: Change i486 to i586
|
2 years ago |
|
patsy
|
b61c47128f
academic/patsy: Fix deps.
|
2 years ago |
|
pcalc
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
pcb
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
penaltymodel
|
6888a39bbc
academic/penaltymodel: Added (penalty model solver).
|
2 years ago |
|
perlprimer
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
petsc
|
5c40a81a02
academic/petsc: Fix deps.
|
2 years ago |
|
pianobooster
|
21e652ec4a
academic/pianobooster: Update email address.
|
2 years ago |
|
plasmidomics
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
plus42
|
fda6f6c0ae
academic/plus42: Updated for version 1.0.15.
|
1 year ago |
|
pomoxis
|
a024c5f014
academic/pomoxis: Added (bioinformatics tools for nanopore research)
|
1 year ago |
|
prank-msa
|
f3528ad44c
academic/prank-msa: Added (probabilistic multiple alignment program)
|
2 years ago |
|
primer3
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
pspp
|
4d2a793be0
academic/pspp: Updated for version 1.6.2.
|
1 year ago |
|
pulseview
|
fdca242a84
academic/pulseview: Updated for version 20220225_4efbe9b.
|
2 years ago |
|
pyCRAC
|
4e45e99f16
academic/pyCRAC: Fix deps.
|
2 years ago |
|
pyfits
|
0ef063bb27
academic/pyfits: Fix deps.
|
2 years ago |
|
pysam
|
71528d865b
academic/pysam: upgraded to version 0.20.0
|
2 years ago |
|
python2-kiwisolver
|
2048ad0540
academic/python2-kiwisolver: Added (Cassowary algorithm)
|
2 years ago |
|
python2-scipy
|
7c7f2a2aa7
academic/python2-scipy: Added (math, science, & engineering py2 lib)
|
2 years ago |
|
python3-ase
|
c19800d2ae
academic/python3-ase: Added (Atomic Simulation Environment (ASE))
|
2 years ago |
|
python3-scipy
|
b9e67970f6
academic/python3-scipy: Added (py3 math, science, and engineering)
|
2 years ago |
|
qalculate-gtk
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
qcl
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
qhull
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
qrupdate
|
b78ad518e7
academic/qrupdate: Change i486 to i586
|
2 years ago |
|
qucs
|
e0201e1c6f
academic/qucs: Align to template.
|
2 years ago |
|
qucs-s
|
76ba37144f
academic/qucs-s: Added (circuit simulator)
|
1 year ago |
|
ramulator
|
9494c46b59
academic/ramulator: Fix github tarball handling.
|
2 years ago |
|
rbio
|
db07c94c92
academic/rbio: Change i486 to i586
|
2 years ago |
|
reduce-algebra
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
root
|
124bcdf71d
academic/root: Fix permissions on README and subdirs
|
2 years ago |
|
rpy2
|
1cd72da7b0
academic/rpy2: upgraded to version 3.5.6
|
2 years ago |
|
sage
|
51d1ed5f31
academic/sage: Updated for version 9.4
|
2 years ago |
|
sage-bin
|
826d363010
academic/sage-bin: Fix .info.
|
2 years ago |
|
samtools
|
89b7bec48f
academic/samtools: Ugrade to version 1.16.1
|
2 years ago |
|
samtools-legacy
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
scidavis
|
4dc1627a83
academic/scidavis: Updated for version 2.9.0.
|
2 years ago |
|
scilab
|
b2519f95fd
various: Use zulu jdk builds for REQUIRES.
|
2 years ago |
|
seaview
|
7905d96d28
academic/seaview: Updated for version 5.0.5.
|
2 years ago |
|
seqkit
|
638e8d5fe7
academic/seqkit: Updated for version 2.2.0.
|
2 years ago |
|
sequence-analysis
|
5aad331ce5
academic/sequence-analysis: Use zulu-openjdk11.
|
2 years ago |
|
sigrok-cli
|
9a3af401a5
academic/sigrok-cli: Updated for version 20220222_525f481.
|
2 years ago |
|
siril
|
e01495481f
academic/siril: Fix VERSION.
|
2 years ago |
|
smath-studio
|
0c45f0b884
academic/smath-studio: Updated for version 1.0.8348
|
2 years ago |
|
snpEff
|
6bc47f9735
academic/snpEff: Build cleanup.
|
2 years ago |
|
solfege
|
93217eda85
academic/solfege: Change i486 to i586
|
2 years ago |
|
spades
|
2db9c0acac
academic/spades: Updated for version 3.15.4.
|
2 years ago |
|
speedcrunch
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
spiceopus
|
a45c603419
academic/spiceopus: Change i486 to i586
|
2 years ago |
|
spidey
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
spqr
|
218fde6720
academic/spqr: Change i486 to i586
|
2 years ago |
|
squizz
|
9f6982b921
academic/squizz: Remove .la files.
|
2 years ago |
|
staden
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
stellarium
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
stellarsolver
|
1a04202887
academic/stellarsolver: Added (Astrometric Plate Solver)
|
2 years ago |
|
stringtie
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
suitesparse
|
e1c9c46ef0
academic/suitesparse: Updated for version 5.11.0
|
2 years ago |
|
suitesparseconfig
|
0dfbef25ad
academic/suitesparseconfig: Change i486 to i586
|
2 years ago |
|
sundials
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
sword
|
a271e183c7
academic/sword: Updated for version 1.9.0.
|
2 years ago |
|
sword-data-kjv
|
407836a1f4
academic/sword-data-kjv: Updated for version 1.9.0_1.
|
2 years ago |
|
t_coffee
|
137a337346
academic/t_coffee: Updated for version 13.45.58.c355d11.
|
2 years ago |
|
tabix-legacy
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
tiemu
|
82ac3ae8f0
academic/tiemu: New maintainer.
|
1 year ago |
|
tilem
|
69612f524c
academic/tilem: Fix for gcc >= 10.x.
|
2 years ago |
|
tilem2
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
tkgate
|
10efd48b60
academic/tkgate: Change i486 to i586
|
2 years ago |
|
topdraw
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
tophat
|
f67f30e039
academic/tophat: Use -std=c++14.
|
2 years ago |
|
treebest-ensembl
|
4d4223562b
academic/treebest-ensembl: Wrap README at 72 columns.
|
2 years ago |
|
treeviewx
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
trfind
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
trimmomatic
|
825a298531
academic/trimmomatic: Use zulu-openjdk11.
|
2 years ago |
|
tuxmath
|
fbfee76567
academic/tuxmath: Rename blits. Remove dupe lan player.
|
2 years ago |
|
tuxtype2
|
3677ef1be7
academic/tuxtype2: Change i486 to i586
|
2 years ago |
|
ucsc-blat
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
ugene
|
81927c36c5
academic/ugene: Updated for version 44.0.
|
2 years ago |
|
umfpack
|
c4686f8092
academic/umfpack: Change i486 to i586
|
2 years ago |
|
units
|
a4059b8578
academic/units: Updated for version 2.22
|
2 years ago |
|
vCAPS_coevolution
|
0a28023757
academic/vCAPS_coevolution: Added (Coevolution Analysis)
|
2 years ago |
|
vcftools
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
velocyto
|
4817c795ce
academic/velocyto: Use correct github URL.
|
1 year ago |
|
verilator
|
2b96e2027e
academic/verilator: Make slack-desc ASCII.
|
2 years ago |
|
verilog
|
48fbd653f5
academic/verilog: Fix download url.
|
2 years ago |
|
veusz
|
3ef6861a4f
academic/veusz: Fix deps.
|
2 years ago |
|
voro++
|
03f969c180
academic/voro++: Added (A 3D Voronoi cell software library)
|
2 years ago |
|
wehi-cellsymphony
|
0c5118948e
academic/wehi-cellsymphony: Use zulu-openjdk11.
|
2 years ago |
|
wehi-deid
|
0fbd13b867
academic/wehi-deid: Use zulu-openjdk11.
|
2 years ago |
|
wehi-hackit
|
39b325db59
academic/wehi-hackit: Use zulu-openjdk11.
|
2 years ago |
|
wehi-weasel
|
996149f768
academic/wehi-weasel: Use zulu-openjdk11.
|
2 years ago |
|
wmcalc
|
1adf6b6560
academic/wmcalc: Fix doinst.sh.
|
2 years ago |
|
wxMaxima
|
d4e75fec32
academic/wxMaxima: Fix github tarball handling.
|
2 years ago |
|
x48
|
cfca4efee2
academic/x48: Added (HP48 Calculator emulator)
|
2 years ago |
|
xcircuit
|
bc7cbd1550
academic/xcircuit: Updated for version 3.10.30. New maintainer.
|
1 year ago |
|
xephem
|
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
|
3 years ago |
|
xflr5
|
ea0caf8261
academic/xflr5: Updated for version 6.54.
|
2 years ago |
|
xfoil
|
ff7885f721
academic/xfoil: Updated the patch to fix build.
|
3 years ago |
|
xiphos
|
9d81ec7fcf
academic/xiphos: Update DEP.
|
1 year ago |
|
xoscope
|
ab348bfe8b
academic/xoscope: Change i486 to i586
|
2 years ago |
|
xsimd
|
7ef099c664
academic/xsimd: Updated for version 10.0.0.
|
2 years ago |
|
yices2
|
8323de654b
academic/yices2: Added (Satisfiability modulo theories solver).
|
2 years ago |
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z3
|
3f3095188a
academic/z3: Updated for version 4.11.2.
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2 years ago |
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zotero
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ae9c0c6578
academic/zotero: Updated for version 6.0.22.
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1 year ago |
B. Watson
4817c795ce
academic/velocyto: Use correct github URL.