Дерево:
cc72a3d5d8
11.0
12.0
12.1
12.2
13.0
13.1
13.37
14.0
14.1
14.2
15.0
bedlam
bedlam-name-fixes
dive
erik
gitignore
libressl-gopher-test
master
misc-fixes
python-renames
rworkman
urchlay
user/aclemons/updates
user/anddt/development/acpica
user/anddt/development/glm
user/anddt/development/gnustep-base
user/anddt/development/gnustep-make
user/anddt/games/assaultcube-reloaded
user/anddt/games/doomseeker
user/anddt/games/prboom-plus
user/anddt/games/rocksndiamonds
user/anddt/games/rottexpr
user/anddt/games/srb2
user/anddt/graphics/blender
user/anddt/graphics/maim
user/anddt/ham/chirp
user/anddt/ham/hamlib
user/anddt/libraries/girara
user/anddt/libraries/goffice
user/anddt/libraries/gtksourceview4
user/anddt/libraries/imlib2
user/anddt/libraries/jsoncpp
user/anddt/libraries/libnova
user/anddt/libraries/libopenmpt
user/anddt/libraries/libtorrent
user/anddt/libraries/wxGTK3
user/anddt/libraries/xmlrpc-c
user/anddt/misc/discount
user/anddt/misc/slop
user/anddt/network/nethogs
user/anddt/network/putty
user/anddt/network/rclone
user/anddt/network/rtorrent
user/anddt/network/sshguard
user/anddt/network/strongswan
user/anddt/network/umurmur
user/anddt/network/yt-dlp
user/anddt/network/znc
user/anddt/office/gnumeric
user/anddt/office/sigil
user/anddt/system/FontAwesome
user/anddt/system/conky
user/anddt/system/fakeroot
user/anddt/system/hplip-plugin
user/anddt/system/postgresql
user/anddt/system/testdisk
user/anddt/system/worker
user/anddt/system/xen
user/anddt/system/zzzfm
user/belka/updates
user/chris.willing/updates
user/dslackw/updates
user/elyk/updates
user/kingbeowulf/updates
user/mario/updates
user/ponce/updates
user/pprkut/updates
willysr
wxWidgets-wip
GPG-KEY
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Heinz Wiesinger
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
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3 роки тому | |
|---|---|---|
| .. | ||
| README | 678b09e63c academic/megax: Added (Molecular Evolutionary Genetics Analysis). | 6 роки тому |
| References | 678b09e63c academic/megax: Added (Molecular Evolutionary Genetics Analysis). | 6 роки тому |
| doinst.sh | 678b09e63c academic/megax: Added (Molecular Evolutionary Genetics Analysis). | 6 роки тому |
| megax.SlackBuild | 63daf9f79a All: Support $PRINT_PACKAGE_NAME env var | 3 роки тому |
| megax.desktop | 678b09e63c academic/megax: Added (Molecular Evolutionary Genetics Analysis). | 6 роки тому |
| megax.info | 1213e0ef77 academic/megax: update for version 10.2.5_1 | 3 роки тому |
| slack-desc | 678b09e63c academic/megax: Added (Molecular Evolutionary Genetics Analysis). | 6 роки тому |
README
MEGA: Molecular Evolutionary Genetics Analysis
Sophisticated and user-friendly software suite for analyzing DNA and
protein sequence data from species and populations. MEGA can be used
with either a graphical user interface, useful for visual exploration
of data and results or a command-line interface (useful for batch or
scripted execution).
MEGA X
MEGA X is the GUI graphical user interface of MEGA and can be run in
one of two modes. The first mode is the "Analyze mode" in which all
GUI tools in MEGA are enabled and visual results explorers are
available for tasks such as editing sequence alignments and viewing
phylogenies. This is the mode that most MEGA users are familiar with.
The second mode is the Prototype mode which is used solely for
generating MEGA Analysis Options (.mao) files that specify analysis
settings when using MEGA from a command shell (megacc). In the MEGA
main form, click the Prototype button and then specify the type of
input data that will be used for analysis.
MEGA CC
The command-line version of MEGA is 'megacc', that implements its core
analysis functions and is useful for iterative and automated execution.
The megacc command requires several options, including the path to a
.mao file and paths to input data file(s) to be analyzed. For example:
$ megacc -a myMaoFile.mao -d mySequenceAlignment.fas -o myOutput
Note 1.
Upon start, MEGA X will create an examples folder with the same name
in your user's home. This is a good place to start if you are not
familiar with MEGA.
Note 2.
This SlackBuild just repackages the binaries for Debian, provided from
upstream. The RedHat packages, currently, do not have 32bit version.
Note 3. IMPORTANT!
SlackBuilds.org thanks Prof. Kumar for permission to use the direct
download URL. MEGA is not free software. Your use is subject to the
licence agreement at:
http://www.megasoftware.net/show_eua
Citing:
MEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for bigger
datasets (Kumar, Stecher, and Tamura 2015).
Sophisticated and user-friendly software suite for analyzing DNA and
protein sequence data from species and populations. MEGA can be used
with either a graphical user interface, useful for visual exploration
of data and results or a command-line interface (useful for batch or
scripted execution).
MEGA X
MEGA X is the GUI graphical user interface of MEGA and can be run in
one of two modes. The first mode is the "Analyze mode" in which all
GUI tools in MEGA are enabled and visual results explorers are
available for tasks such as editing sequence alignments and viewing
phylogenies. This is the mode that most MEGA users are familiar with.
The second mode is the Prototype mode which is used solely for
generating MEGA Analysis Options (.mao) files that specify analysis
settings when using MEGA from a command shell (megacc). In the MEGA
main form, click the Prototype button and then specify the type of
input data that will be used for analysis.
MEGA CC
The command-line version of MEGA is 'megacc', that implements its core
analysis functions and is useful for iterative and automated execution.
The megacc command requires several options, including the path to a
.mao file and paths to input data file(s) to be analyzed. For example:
$ megacc -a myMaoFile.mao -d mySequenceAlignment.fas -o myOutput
Note 1.
Upon start, MEGA X will create an examples folder with the same name
in your user's home. This is a good place to start if you are not
familiar with MEGA.
Note 2.
This SlackBuild just repackages the binaries for Debian, provided from
upstream. The RedHat packages, currently, do not have 32bit version.
Note 3. IMPORTANT!
SlackBuilds.org thanks Prof. Kumar for permission to use the direct
download URL. MEGA is not free software. Your use is subject to the
licence agreement at:
http://www.megasoftware.net/show_eua
Citing:
MEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for bigger
datasets (Kumar, Stecher, and Tamura 2015).