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Heinz Wiesinger
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
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3 tahun lalu | |
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| .. | ||
| README | 201f403821 academic/tabix-legacy: Added (Generic indexer). | 5 tahun lalu |
| slack-desc | 201f403821 academic/tabix-legacy: Added (Generic indexer). | 5 tahun lalu |
| tabix-legacy.SlackBuild | 63daf9f79a All: Support $PRINT_PACKAGE_NAME env var | 3 tahun lalu |
| tabix-legacy.info | 201f403821 academic/tabix-legacy: Added (Generic indexer). | 5 tahun lalu |
README
Tabix indexes a TAB-delimited genome position file in.tab.bgz and
creates an index file in.tab.bgz.tbi when region is absent from the
command-line. The input data file must be position sorted and
compressed by bgzip which has a gzip like interface. After indexing,
tabix is able to quickly retrieve data lines overlapping regions
specified in the format "chr:beginPos-endPos". Fast data retrieval
also works over network if URI is given as a file name and in this
case the index file will be downloaded if it is not present locally.
NOTE!
Tabix is now included in htslib. This is an older version of the
program, kept here for compatibility with Ugene. You can safely install
it along htslib. When you start Ugene, go to Settings > Preferences >
External Tools and manually select the legacy binary in /usr/bin/
creates an index file in.tab.bgz.tbi when region is absent from the
command-line. The input data file must be position sorted and
compressed by bgzip which has a gzip like interface. After indexing,
tabix is able to quickly retrieve data lines overlapping regions
specified in the format "chr:beginPos-endPos". Fast data retrieval
also works over network if URI is given as a file name and in this
case the index file will be downloaded if it is not present locally.
NOTE!
Tabix is now included in htslib. This is an older version of the
program, kept here for compatibility with Ugene. You can safely install
it along htslib. When you start Ugene, go to Settings > Preferences >
External Tools and manually select the legacy binary in /usr/bin/