bio-rna.md 5.5 KB
RNA
- http://en.wikipedia.org/wiki/Sequencing
- http://en.wikipedia.org/wiki/Shotgun_sequencing
- mRNA :: http://en.wikipedia.org/wiki/Messenger_RNA
- Precursor mRNA (pre-mRNA) is an immature single strand of messenger ribonucleic acid (mRNA).
- RNA Sequencing {"Whole Transcriptome Shotgun Sequencing"("WTSS")}
- Transfer RNA and Anticodons
- Introns
- Exomes and Exome sequencing
- Non-coding RNA :: http://en.wikipedia.org/wiki/Non-coding_RNA
- snoRNA :: http://en.wikipedia.org/wiki/Small_nucleolar_RNA
- miRNA :: http://en.wikipedia.org/wiki/MicroRNA
- siRNA :: http://en.wikipedia.org/wiki/Small_interfering_RNA
- snRNA :: http://en.wikipedia.org/wiki/Small_nuclear_RNA
- exRNA :: http://en.wikipedia.org/wiki/Extracellular_RNA
- piRNA :: http://en.wikipedia.org/wiki/Piwi-interacting_RNA
- long ncRNAs :: http://en.wikipedia.org/wiki/Long_non-coding_RNA
- RNA (Ribonucleoprotein) :: http://en.wikipedia.org/wiki/Ribonucleoprotein
- Post-transcriptional regulation :: http://en.wikipedia.org/wiki/Post-transcriptional_regulation
- Three prime untranslated region (3'-UTR) :: http://en.wikipedia.org/wiki/Three_prime_untranslated_region
- Polyadenylation is the addition of a poly(A) tail to a primary transcript RNA.
- De novo transcriptome assembly :: http://en.wikipedia.org/wiki/De_novo_transcriptome_assembly
- Sanger sequencing :: http://en.wikipedia.org/wiki/Sequencing#Sanger_sequencing
- K-mer :: http://en.wikipedia.org/wiki/K-mer
- Human-transcriptome database for alternative splicing :: http://en.wikipedia.org/wiki/Human-transcriptome_database_for_alternative_splicing
- Biomarker :: http://en.wikipedia.org/wiki/Biomarker
- Ribosome :: http://en.wikipedia.org/wiki/Ribosome
- Mutation :: http://en.wikipedia.org/wiki/Mutation
- Watson-Crick base pairs (guanine-cytosine and adenine-thymine).
- Promoter : http://en.wikipedia.org/wiki/Promoter_%28genetics%29
- Sigma factor :: http://en.wikipedia.org/wiki/Sigma_factor
- RNA polymerase I :: http://en.wikipedia.org/wiki/RNA_polymerase_I
- RNA polymerase II :: http://en.wikipedia.org/wiki/RNA_polymerase_II
- RNA polymerase III :: http://en.wikipedia.org/wiki/RNA_polymerase_III
- POLR2A - In humans, the enzyme (DNA-directed RNA polymerase II subunit RPB1) is encoded by the POLR2A gene.
- TATA box :: http://en.wikipedia.org/wiki/TATA_box
- TATA-binding protein :: http://en.wikipedia.org/wiki/TATA-binding_protein
- Nucleic acid thermodynamics :: http://en.wikipedia.org/wiki/Nucleic_acid_thermodynamics
- Keep DNA Methylation Experiments in Check
- http://en.wikipedia.org/wiki/Nucleic_acid
- Protein sequencing was replaced by nucleic acid technology.
Papers
- Mitochondrial cob and cox1 Genes and Editing of the Corresponding mRNAs in Dinophysis acuminata from Narragansett Bay, with Special Reference to the Phylogenetic Position of the Genus Dinophysis
- Sequestration of multiple RNA recognition motif-containing proteins by C9orf72 repeat expansions. Europemc.org link.
- Mistimed sleep disrupts circadian regulation of the human transcriptome.
- Rsx is a metatherian RNA with Xist-like properties in X-chromosome inactivation, Grant J et al. (2012). Nature 487(7406):254-8.
- De novo transcriptome assembly with ABySS
- How microbes build a powerful antibiotic
- On emerging nuclear order, by I.Rajapakse and M.Groudine, 2011. J Cell Biol 192(5):711-21.
- New insights into nucleosome and chromatin structure: an ordered state or a disordered affair?, Karolin Luger, Mekonnen L. Dechassa, and David J. Tremethick, Nat Rev Mol Cell Biol 13(7):436-47, Published online Jun 22, 2012. doi: 10.1038/nrm3382.
- Combinatorial complexity in chromatin structure and function: revisiting the histone code by Rando OJ. (2012).
- Molecular mechanisms of long noncoding RNAs. Mol Cell 43(6):904-14, KC.Wang, HY.Chang ,2011.
- Use of Heterologous Complementary DNA Array Screening to Analyze BovineOocyte Transcriptome and Its Evolution During In Vitro Maturation, Rozenn Dalbie`s-Tran and Pascal Mermillod.
- From early lessons to new frontiers: the worm as a treasure trove of small RNA biology