regraphlet/GTL-example/finemap-0.5/doc

COLORTEX(1)

NAME
colortex - output color LaTeX file from a tree file

SYNOPSIS
colortex [--document] [--font-size fontsize] [--str-fname filename]
[--small-mutation color] [--large-mutation color]
[--recombination color] filename

DESCRIPTION
Colortex takes the output of the profile(1) program and creates a
LaTeX table which highlights differences of a haplotype from its
ancestor in the evolutionary tree.

OPTIONS
--document Set this option to produce a document suitable
for processing by the LaTeX program. Default:
(unset)
--font-size fontsize LaTeX fontsize; see Section 5.8.1 in Lamport's
LaTeX User's Guide and Reference Manual.
Default: (none)
--str-fname filename File containing sizes of the repeated units of
the STR marker at each locus. Default: (none)
--small-mutation color Color for small mutations. For more colors,
see colordvi.tex. Default: Blue
--large-mutation color Color for large mutations. Default: Purple
--recombination color Color for recombinations. Default: Red
filename File containing a tree, like the output of the
profile program.

AUTHOR
Johnny C. Lam (lamj@stat.cmu.edu)