Ветка:
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11.0
12.0
12.1
12.2
13.0
13.1
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14.0
14.1
14.2
15.0
bedlam
bedlam-name-fixes
dive
erik
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libressl-gopher-test
master
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python-renames
rworkman
urchlay
user/aclemons/updates
user/anddt/development/acpica
user/anddt/development/glm
user/anddt/development/gnustep-base
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user/anddt/games/srb2
user/anddt/graphics/blender
user/anddt/graphics/maim
user/anddt/ham/chirp
user/anddt/ham/hamlib
user/anddt/libraries/girara
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user/anddt/libraries/libopenmpt
user/anddt/libraries/libtorrent
user/anddt/libraries/wxGTK3
user/anddt/libraries/xmlrpc-c
user/anddt/misc/discount
user/anddt/misc/slop
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user/anddt/network/putty
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user/anddt/network/sshguard
user/anddt/network/strongswan
user/anddt/network/umurmur
user/anddt/network/yt-dlp
user/anddt/network/znc
user/anddt/office/gnumeric
user/anddt/office/sigil
user/anddt/system/FontAwesome
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user/anddt/system/fakeroot
user/anddt/system/hplip-plugin
user/anddt/system/postgresql
user/anddt/system/testdisk
user/anddt/system/worker
user/anddt/system/xen
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user/chris.willing/updates
user/dslackw/updates
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willysr
wxWidgets-wip
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B. Watson
de0652471d
academic/ncbi-rmblastn: Allow ARCH=i586 in environment.
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2 лет назад | |
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| .. | ||
| README | 3f6353744d academic/ncbi-rmblastn: Added (NCBI RMBlast). | 6 лет назад |
| ncbi-rmblastn.SlackBuild | de0652471d academic/ncbi-rmblastn: Allow ARCH=i586 in environment. | 2 лет назад |
| ncbi-rmblastn.info | a986484738 academic/ncbi-rmblastn: Update DEP. | 5 лет назад |
| slack-desc | 3f6353744d academic/ncbi-rmblastn: Added (NCBI RMBlast). | 6 лет назад |
README
RMBlast is a RepeatMasker compatible version of the standard NCBI BLAST
suite. The primary difference between this distribution and the NCBI
distribution is the addition of a new program "rmblastn" for use with
RepeatMasker and RepeatModeler.
RMBlast supports RepeatMasker searches by adding a few necessary
features to the stock NCBI blastn program. These include:
- Support for custom matrices ( without KA-Statistics )
- Support for cross_match-like complexity adjusted scoring
(Cross_match is Phil Green's seeded smith-waterman search algorithm:
www.phrap.org )
- Support for cross_match-like masklevel filtering.
suite. The primary difference between this distribution and the NCBI
distribution is the addition of a new program "rmblastn" for use with
RepeatMasker and RepeatModeler.
RMBlast supports RepeatMasker searches by adding a few necessary
features to the stock NCBI blastn program. These include:
- Support for custom matrices ( without KA-Statistics )
- Support for cross_match-like complexity adjusted scoring
(Cross_match is Phil Green's seeded smith-waterman search algorithm:
www.phrap.org )
- Support for cross_match-like masklevel filtering.