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11.0
12.0
12.1
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willysr
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Heinz Wiesinger
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
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2 years ago | |
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| README | 3e67292656 academic/meme-db-tgene: Added (MEME Suite T-gene databases) | 4 years ago |
| meme-db-tgene.SlackBuild | 63daf9f79a All: Support $PRINT_PACKAGE_NAME env var | 2 years ago |
| meme-db-tgene.info | b809ee9794 academic/meme-db-tgene: update copyright years | 3 years ago |
| slack-desc | 3e67292656 academic/meme-db-tgene: Added (MEME Suite T-gene databases) | 4 years ago |
README
T-Gene Databases (updated 12 Oct 2019) to be used with MEME Suite:
Genome + Histone/Expression Data
Human hg19 (ENCODE Tissue Panel)
Human hg19 (Epigenomic Roadmap Tissue Panel)
Mouse mm9 (ENCODE Tissue Panel)
Genomes Only
Arabidopsis thaliana TAIR10 (Ensembl)
Caenorhabditis elegans WBcel235 (Ensembl)
Caenorhabditis elegans ce11 (UCSC)
Danio rerio GRCz11 (Ensembl)
Danio rerio danRer11 (UCSC)
Drosophila melanogaster BDGP6 (Ensembl)
Drosophila melanogaster dm6 (UCSC)
Homo sapiens GRCh38 (Ensembl)
Homo sapiens hg38 (UCSC)
Mus musculus GRCm38 (Ensembl)
Mus musculus mm10 (UCSC)
Rattus norvegicus Rnor_6 (Ensembl)
Rattus norvegicus rn6 (UCSC)
Saccharomyces cerevisiae R64-1-1 (Ensembl)
Saccharomyces cerevisiae sacCer3 (UCSC)
Note!!!
The unarchived size of this is ~2.6 GB
Genome + Histone/Expression Data
Human hg19 (ENCODE Tissue Panel)
Human hg19 (Epigenomic Roadmap Tissue Panel)
Mouse mm9 (ENCODE Tissue Panel)
Genomes Only
Arabidopsis thaliana TAIR10 (Ensembl)
Caenorhabditis elegans WBcel235 (Ensembl)
Caenorhabditis elegans ce11 (UCSC)
Danio rerio GRCz11 (Ensembl)
Danio rerio danRer11 (UCSC)
Drosophila melanogaster BDGP6 (Ensembl)
Drosophila melanogaster dm6 (UCSC)
Homo sapiens GRCh38 (Ensembl)
Homo sapiens hg38 (UCSC)
Mus musculus GRCm38 (Ensembl)
Mus musculus mm10 (UCSC)
Rattus norvegicus Rnor_6 (Ensembl)
Rattus norvegicus rn6 (UCSC)
Saccharomyces cerevisiae R64-1-1 (Ensembl)
Saccharomyces cerevisiae sacCer3 (UCSC)
Note!!!
The unarchived size of this is ~2.6 GB