Branch:
user/anddt/network/znc
11.0
12.0
12.1
12.2
13.0
13.1
13.37
14.0
14.1
14.2
15.0
bedlam
bedlam-name-fixes
dive
erik
gitignore
libressl-gopher-test
master
misc-fixes
python-renames
rworkman
urchlay
user/aclemons/updates
user/anddt/development/acpica
user/anddt/development/glm
user/anddt/development/gnustep-base
user/anddt/development/gnustep-make
user/anddt/games/assaultcube-reloaded
user/anddt/games/doomseeker
user/anddt/games/prboom-plus
user/anddt/games/rocksndiamonds
user/anddt/games/rottexpr
user/anddt/games/srb2
user/anddt/graphics/blender
user/anddt/graphics/maim
user/anddt/ham/chirp
user/anddt/ham/hamlib
user/anddt/libraries/girara
user/anddt/libraries/goffice
user/anddt/libraries/gtksourceview4
user/anddt/libraries/imlib2
user/anddt/libraries/jsoncpp
user/anddt/libraries/libnova
user/anddt/libraries/libopenmpt
user/anddt/libraries/libtorrent
user/anddt/libraries/wxGTK3
user/anddt/libraries/xmlrpc-c
user/anddt/misc/discount
user/anddt/misc/slop
user/anddt/network/nethogs
user/anddt/network/putty
user/anddt/network/rclone
user/anddt/network/rtorrent
user/anddt/network/sshguard
user/anddt/network/strongswan
user/anddt/network/umurmur
user/anddt/network/yt-dlp
user/anddt/network/znc
user/anddt/office/gnumeric
user/anddt/office/sigil
user/anddt/system/FontAwesome
user/anddt/system/conky
user/anddt/system/fakeroot
user/anddt/system/hplip-plugin
user/anddt/system/postgresql
user/anddt/system/testdisk
user/anddt/system/worker
user/anddt/system/xen
user/anddt/system/zzzfm
user/belka/updates
user/chris.willing/updates
user/dslackw/updates
user/elyk/updates
user/kingbeowulf/updates
user/mario/updates
user/ponce/updates
user/pprkut/updates
willysr
wxWidgets-wip
GPG-KEY
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Heinz Wiesinger
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
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2 years ago | |
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| README | 3057c44df8 academic/exonerate: Added (A generic tool for sequence alignment). | 7 years ago |
| exonerate.SlackBuild | 63daf9f79a All: Support $PRINT_PACKAGE_NAME env var | 2 years ago |
| exonerate.info | 094806981f academic/exonerate: Switch to https. | 6 years ago |
| slack-desc | 094806981f academic/exonerate: Switch to https. | 6 years ago |
README
Exonerate: a generic tool for sequence alignment
Exonerate is a generic tool for pairwise sequence comparison. It allows
you to align sequences using a many alignment models, either exhaustive
dynamic programming or a variety of heuristics.
The Exonerate package comes with a selection of utilities for performing
simple manipulations quickly on fasta files beyond 2Gb.
Many of the algorithms in exonerate are described in:
Slater GS and Birney E (2005) Automated generation of heuristics for
biological sequence comparison. BMC Bioinformatics 6:31;
doi: 10.1186/1471-2105-6-31
Exonerate is a generic tool for pairwise sequence comparison. It allows
you to align sequences using a many alignment models, either exhaustive
dynamic programming or a variety of heuristics.
The Exonerate package comes with a selection of utilities for performing
simple manipulations quickly on fasta files beyond 2Gb.
Many of the algorithms in exonerate are described in:
Slater GS and Birney E (2005) Automated generation of heuristics for
biological sequence comparison. BMC Bioinformatics 6:31;
doi: 10.1186/1471-2105-6-31