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- Spidey: an mRNA-to-genomic alignment program.
- Spidey is a tool for aligning one or more mRNA sequences to a given
- genomic sequence. It was written with two main goals in mind:
- 1) find good alignments regardless of intron size
- 2) avoid getting confused by nearby pseudogenes and paralogs.
- The following programs provide a GUI to run spidey:
- -ugene
- -perlprimer
- This is just repackaging of precompiled binaries:
- - x86 platform: the executable is provided by upstream (NCBI).
- - x86_64 platform: the executable is kindly provided by the UniPro
- Ugene project, where it is part of their External Tools meta-package.
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