Branch:
user/anddt/development/glm
11.0
12.0
12.1
12.2
13.0
13.1
13.37
14.0
14.1
14.2
15.0
bedlam
bedlam-name-fixes
dive
erik
gitignore
libressl-gopher-test
master
misc-fixes
python-renames
rworkman
urchlay
user/aclemons/updates
user/anddt/development/acpica
user/anddt/development/glm
user/anddt/development/gnustep-base
user/anddt/development/gnustep-make
user/anddt/games/assaultcube-reloaded
user/anddt/games/doomseeker
user/anddt/games/prboom-plus
user/anddt/games/rocksndiamonds
user/anddt/games/rottexpr
user/anddt/games/srb2
user/anddt/graphics/blender
user/anddt/graphics/maim
user/anddt/ham/chirp
user/anddt/ham/hamlib
user/anddt/libraries/girara
user/anddt/libraries/goffice
user/anddt/libraries/gtksourceview4
user/anddt/libraries/imlib2
user/anddt/libraries/jsoncpp
user/anddt/libraries/libnova
user/anddt/libraries/libopenmpt
user/anddt/libraries/libtorrent
user/anddt/libraries/wxGTK3
user/anddt/libraries/xmlrpc-c
user/anddt/misc/discount
user/anddt/misc/slop
user/anddt/network/nethogs
user/anddt/network/putty
user/anddt/network/rclone
user/anddt/network/rtorrent
user/anddt/network/sshguard
user/anddt/network/strongswan
user/anddt/network/umurmur
user/anddt/network/yt-dlp
user/anddt/network/znc
user/anddt/office/gnumeric
user/anddt/office/sigil
user/anddt/system/FontAwesome
user/anddt/system/conky
user/anddt/system/fakeroot
user/anddt/system/hplip-plugin
user/anddt/system/postgresql
user/anddt/system/testdisk
user/anddt/system/worker
user/anddt/system/xen
user/anddt/system/zzzfm
user/belka/updates
user/chris.willing/updates
user/dslackw/updates
user/elyk/updates
user/kingbeowulf/updates
user/mario/updates
user/ponce/updates
user/pprkut/updates
willysr
wxWidgets-wip
GPG-KEY
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B. Watson
b49e01679a
academic/EMBOSS: Remove .la files.
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2 years ago | |
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| .. | ||
| EMBOSS.SlackBuild | b49e01679a academic/EMBOSS: Remove .la files. | 2 years ago |
| EMBOSS.desktop | 1521887388 academic/EMBOSS: Make .desktop validate. | 7 years ago |
| EMBOSS.info | 4d64a77588 academic/EMBOSS: Use zulu-openjdk11. | 2 years ago |
| EMBOSS.png | 9855d21463 academic/EMBOSS: Updated for version 6.5.7. | 11 years ago |
| README | 9855d21463 academic/EMBOSS: Updated for version 6.5.7. | 11 years ago |
| References | 9855d21463 academic/EMBOSS: Updated for version 6.5.7. | 11 years ago |
| doinst.sh | 4e126c8b57 academic/EMBOSS: Added (European Molecular Biology OSS) | 12 years ago |
| slack-desc | ec514e32c4 Multiple: update email, year and slack-desc | 8 years ago |
README
EMBOSS is "The European Molecular Biology Open Software Suite".
EMBOSS is a free Open Source software analysis package specially
developed for the needs of the molecular biology (e.g. EMBnet) user
community. The software automatically copes with data in a variety of
formats and even allows transparent retrieval of sequence data from
the web. Also, as extensive libraries are provided with the package,
it is a platform to allow other scientists to develop and release
software in true open source spirit. EMBOSS also integrates a range of
currently available packages and tools for sequence analysis into a
seamless whole. EMBOSS breaks the historical trend towards commercial
software packages.
Within EMBOSS you will find around hundreds of programs (applications)
covering areas such as:
- Sequence alignment
- Rapid database searching with sequence patterns
- Protein motif identification, including domain analysis
- Nucleotide sequence pattern analysis -- for example to identify CpG
islands or repeats
- Codon usage analysis for small genomes
- Rapid identification of sequence patterns in large scale sequence
sets
- Presentation tools for publication
Optional, run-time dependencies are clustalw and primer3 -- needed if
you want to use the wrappers emma and eprimer32.
For details and citation:
EMBOSS: The European Molecular Biology Open Software Suite (2000)
Rice,P. Longden,I. and Bleasby,A. Trends in Genetics 16, (6) pp276-277
EMBOSS is a free Open Source software analysis package specially
developed for the needs of the molecular biology (e.g. EMBnet) user
community. The software automatically copes with data in a variety of
formats and even allows transparent retrieval of sequence data from
the web. Also, as extensive libraries are provided with the package,
it is a platform to allow other scientists to develop and release
software in true open source spirit. EMBOSS also integrates a range of
currently available packages and tools for sequence analysis into a
seamless whole. EMBOSS breaks the historical trend towards commercial
software packages.
Within EMBOSS you will find around hundreds of programs (applications)
covering areas such as:
- Sequence alignment
- Rapid database searching with sequence patterns
- Protein motif identification, including domain analysis
- Nucleotide sequence pattern analysis -- for example to identify CpG
islands or repeats
- Codon usage analysis for small genomes
- Rapid identification of sequence patterns in large scale sequence
sets
- Presentation tools for publication
Optional, run-time dependencies are clustalw and primer3 -- needed if
you want to use the wrappers emma and eprimer32.
For details and citation:
EMBOSS: The European Molecular Biology Open Software Suite (2000)
Rice,P. Longden,I. and Bleasby,A. Trends in Genetics 16, (6) pp276-277