Tree:
cc72a3d5d8
11.0
12.0
12.1
12.2
13.0
13.1
13.37
14.0
14.1
14.2
15.0
bedlam
bedlam-name-fixes
dive
erik
gitignore
libressl-gopher-test
master
misc-fixes
python-renames
rworkman
urchlay
user/aclemons/updates
user/anddt/development/acpica
user/anddt/development/glm
user/anddt/development/gnustep-base
user/anddt/development/gnustep-make
user/anddt/games/assaultcube-reloaded
user/anddt/games/doomseeker
user/anddt/games/prboom-plus
user/anddt/games/rocksndiamonds
user/anddt/games/rottexpr
user/anddt/games/srb2
user/anddt/graphics/blender
user/anddt/graphics/maim
user/anddt/ham/chirp
user/anddt/ham/hamlib
user/anddt/libraries/girara
user/anddt/libraries/goffice
user/anddt/libraries/gtksourceview4
user/anddt/libraries/imlib2
user/anddt/libraries/jsoncpp
user/anddt/libraries/libnova
user/anddt/libraries/libopenmpt
user/anddt/libraries/libtorrent
user/anddt/libraries/wxGTK3
user/anddt/libraries/xmlrpc-c
user/anddt/misc/discount
user/anddt/misc/slop
user/anddt/network/nethogs
user/anddt/network/putty
user/anddt/network/rclone
user/anddt/network/rtorrent
user/anddt/network/sshguard
user/anddt/network/strongswan
user/anddt/network/umurmur
user/anddt/network/yt-dlp
user/anddt/network/znc
user/anddt/office/gnumeric
user/anddt/office/sigil
user/anddt/system/FontAwesome
user/anddt/system/conky
user/anddt/system/fakeroot
user/anddt/system/hplip-plugin
user/anddt/system/postgresql
user/anddt/system/testdisk
user/anddt/system/worker
user/anddt/system/xen
user/anddt/system/zzzfm
user/belka/updates
user/chris.willing/updates
user/dslackw/updates
user/elyk/updates
user/kingbeowulf/updates
user/mario/updates
user/ponce/updates
user/pprkut/updates
willysr
wxWidgets-wip
GPG-KEY
15.0-20230325.1
15.0-20230318.1
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15.0-20230107.1
15.0-20221231.1
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15.0-20221217.1
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14.2-20210417.1
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14.2-20200614.1
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14.2-20200424.1
14.2-20200419.1
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14.2-20200406.1
14.2-20200404.1
14.2-20200328.1
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14.2-20200112.1
14.2-20200103.1
14.2-20191231.1
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14.2-20190504.1
14.2-20190427.1
14.2-20190420.1
14.2-20190413.1
14.2-20190406.1
14.2-20190330.1
14.2-20190323.1
14.2-20190316.1
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14.2-20190202.1
14.2-20190126.1
14.2-20190119.1
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14.2-20190105.1
14.2-20181229.1
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14.2-20181222.1
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14.2-20181020.1
14.2-20181013.1
14.2-20181006.1
14.2-20180929.1
14.2-20180923.1
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14.2-20180908.1
14.2-20180901.1
14.2-20180825.1
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14.2-20180804.1
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14.2-20180714.1
14.2-20180707.1
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14.2-20180609.1
14.2-20180602.1
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Heinz Wiesinger
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
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| LICENSE | 79d1caba14 academic/trfind: Added (Tandem repeats finder: analyze DNA seqs). | 6 years ago |
| README | 79d1caba14 academic/trfind: Added (Tandem repeats finder: analyze DNA seqs). | 6 years ago |
| References | 79d1caba14 academic/trfind: Added (Tandem repeats finder: analyze DNA seqs). | 6 years ago |
| slack-desc | 79d1caba14 academic/trfind: Added (Tandem repeats finder: analyze DNA seqs). | 6 years ago |
| trfind.SlackBuild | 63daf9f79a All: Support $PRINT_PACKAGE_NAME env var | 3 years ago |
| trfind.info | 4980c2baef academic/trfind: Updated for version 4.09.1. | 4 years ago |
README
Tandem repeats finder: a program to analyze DNA sequences
A tandem repeat in DNA is two or more adjacent, approximate copies of a
pattern of nucleotides. Tandem Repeats Finder is a program to locate and
display tandem repeats in DNA sequences. In order to use the program,
the user submits a sequence in FASTA format.
Example usage:
trf hg38.fasta 2 5 7 80 10 50 2000 -l 6
LICENSE:
Please read the License Terms before downloading:
https://tandem.bu.edu/trf/trf.license.html
Please cite:
G. Benson "Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acids Research (1999) Vol. 27, No. 2, pp. 573-580.
A tandem repeat in DNA is two or more adjacent, approximate copies of a
pattern of nucleotides. Tandem Repeats Finder is a program to locate and
display tandem repeats in DNA sequences. In order to use the program,
the user submits a sequence in FASTA format.
Example usage:
trf hg38.fasta 2 5 7 80 10 50 2000 -l 6
LICENSE:
Please read the License Terms before downloading:
https://tandem.bu.edu/trf/trf.license.html
Please cite:
G. Benson "Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acids Research (1999) Vol. 27, No. 2, pp. 573-580.