Albero (Tree):
cc72a3d5d8
11.0
12.0
12.1
12.2
13.0
13.1
13.37
14.0
14.1
14.2
15.0
bedlam
bedlam-name-fixes
dive
erik
gitignore
libressl-gopher-test
master
misc-fixes
python-renames
rworkman
urchlay
user/aclemons/updates
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user/anddt/development/glm
user/anddt/development/gnustep-base
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user/anddt/network/umurmur
user/anddt/network/yt-dlp
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user/anddt/office/gnumeric
user/anddt/office/sigil
user/anddt/system/FontAwesome
user/anddt/system/conky
user/anddt/system/fakeroot
user/anddt/system/hplip-plugin
user/anddt/system/postgresql
user/anddt/system/testdisk
user/anddt/system/worker
user/anddt/system/xen
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user/chris.willing/updates
user/dslackw/updates
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willysr
wxWidgets-wip
GPG-KEY
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Heinz Wiesinger
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
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3 anni fa | |
|---|---|---|
| .. | ||
| LICENSE | 8c35f38c04 academic/paml: Added (Phylogenetic Analysis by Maximum Likelihood). | 11 anni fa |
| README | c8eed62852 academic/paml: Updated for version 4.8a. | 10 anni fa |
| References | 8c35f38c04 academic/paml: Added (Phylogenetic Analysis by Maximum Likelihood). | 11 anni fa |
| paml.SlackBuild | 63daf9f79a All: Support $PRINT_PACKAGE_NAME env var | 3 anni fa |
| paml.info | 2fa79b504d academic/paml: Updated for version 4.9j. | 4 anni fa |
| slack-desc | 354557ac88 academic/paml: Updated for version 4.9g. | 6 anni fa |
README
PAML: Phylogenetic Analysis by Maximum Likelihood
PAML is a package of programs for phylogenetic analyses of DNA or
protein sequences using maximum likelihood. PAML is not good for tree
making. It may be used to estimate parameters and test hypotheses to
study the evolutionary process, when you have reconstructed trees
using other programs such as PAUP*, PHYLIP, MOLPHY, PhyML, RaxML, etc.
Notes about running of PAML programs and the package:
- Example datasets are included in /usr/share/paml/examples
- Control files for PAML programs are in /usr/share/paml
- Additional executables are placed in /usr/libexec/paml
Suggested citation:
Yang, Z. 2007. PAML 4: a program package for phylogenetic analysis by
maximum likelihood. Molecular Biology and Evolution 24: 1586-1591
PAML is a package of programs for phylogenetic analyses of DNA or
protein sequences using maximum likelihood. PAML is not good for tree
making. It may be used to estimate parameters and test hypotheses to
study the evolutionary process, when you have reconstructed trees
using other programs such as PAUP*, PHYLIP, MOLPHY, PhyML, RaxML, etc.
Notes about running of PAML programs and the package:
- Example datasets are included in /usr/share/paml/examples
- Control files for PAML programs are in /usr/share/paml
- Additional executables are placed in /usr/libexec/paml
Suggested citation:
Yang, Z. 2007. PAML 4: a program package for phylogenetic analysis by
maximum likelihood. Molecular Biology and Evolution 24: 1586-1591