Andrew Clemons b2519f95fd various: Use zulu jdk builds for REQUIRES. 2 years ago
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README 25b5e0f230 academic/fastqc: Added (quality control tool). 9 years ago
doinst.sh c438969e42 academic/fastqc: Updated for version 0.11.8 + new maintainer. 5 years ago
fastqc.SlackBuild 63daf9f79a All: Support $PRINT_PACKAGE_NAME env var 3 years ago
fastqc.desktop 25b5e0f230 academic/fastqc: Added (quality control tool). 9 years ago
fastqc.info b2519f95fd various: Use zulu jdk builds for REQUIRES. 2 years ago
fastqc.png 25b5e0f230 academic/fastqc: Added (quality control tool). 9 years ago
slack-desc 25b5e0f230 academic/fastqc: Added (quality control tool). 9 years ago

README

FastQC: A quality control tool for high throughput sequence data

FastQC aims to provide a simple way to do some quality control checks
on raw sequence data coming from high throughput sequencing pipelines.
It provides a modular set of analyses which you can use to give a
quick impression of whether your data has any problems of which you
should be aware before doing any further analysis.

The main functions of FastQC are

- Import of data from BAM, SAM or FastQ files (any variant)
- Providing a quick overview to tell you in which areas there may be
problems
- Summary graphs and tables to quickly assess your data
- Export of results to an HTML based permanent report
- Offline operation to allow automated generation of reports without
running the interactive application