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Heinz Wiesinger
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
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| README | 413b996543 academic/bedtools: Updated for version 2.27.1. | %!s(int64=6) %!d(string=hai) anos |
| bedtools.SlackBuild | 63daf9f79a All: Support $PRINT_PACKAGE_NAME env var | %!s(int64=3) %!d(string=hai) anos |
| bedtools.info | f1ba9aebb8 academic/bedtools: update for version 2.30.0 | %!s(int64=3) %!d(string=hai) anos |
| slack-desc | feb7ad033a academic/bedtools: Added (genome arithmetic). | %!s(int64=10) %!d(string=hai) anos |
README
Collectively, the bedtools utilities are a swiss-army knife of tools
for a wide-range of genomics analysis tasks. The most widely-used
tools enable genome arithmetic: that is, set theory on the genome. For
example, bedtools allows one to intersect, merge, count, complement,
and shuffle genomic intervals from multiple files in widely-used
genomic file formats such as BAM, BED, GFF/GTF, VCF.
While each individual tool is designed to do a relatively simple task
(e.g., intersect two interval files), quite sophisticated analyses can
be conducted by combining multiple bedtools operations on the UNIX
command line.
for a wide-range of genomics analysis tasks. The most widely-used
tools enable genome arithmetic: that is, set theory on the genome. For
example, bedtools allows one to intersect, merge, count, complement,
and shuffle genomic intervals from multiple files in widely-used
genomic file formats such as BAM, BED, GFF/GTF, VCF.
While each individual tool is designed to do a relatively simple task
(e.g., intersect two interval files), quite sophisticated analyses can
be conducted by combining multiple bedtools operations on the UNIX
command line.