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Petar Petrov
7a410e6a80
academic/mumsa: Added (A tool to assess MSA quality)
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1 年之前 | |
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| .. | ||
| README | 7a410e6a80 academic/mumsa: Added (A tool to assess MSA quality) | 1 年之前 |
| References.txt | 7a410e6a80 academic/mumsa: Added (A tool to assess MSA quality) | 1 年之前 |
| mumsa.SlackBuild | 7a410e6a80 academic/mumsa: Added (A tool to assess MSA quality) | 1 年之前 |
| mumsa.info | 7a410e6a80 academic/mumsa: Added (A tool to assess MSA quality) | 1 年之前 |
| slack-desc | 7a410e6a80 academic/mumsa: Added (A tool to assess MSA quality) | 1 年之前 |
README
Mumsa is a tool for automatic assessment of alignment quality. A number
of alternate (to be compared) multiple alignments have to be generated
and submitted.
Mumsa computes:
- the average overlap score (AOS), reflecting the difficulty of aligning
the sequences
- multiple overlap score (MOS) indicating the quality of each individual
alignment.
Both scores range between one and zero.
CITING
Lassmann T, Sonnhammer EL. Kalign, Kalignvu and Mumsa: web servers for
multiple sequence alignment. Nucleic Acids Res. 2006 Jul 1;34(Web Server
issue): W596-9. doi: 10.1093/nar/gkl191.
PMID: 16845078; PMCID: PMC1538774
of alternate (to be compared) multiple alignments have to be generated
and submitted.
Mumsa computes:
- the average overlap score (AOS), reflecting the difficulty of aligning
the sequences
- multiple overlap score (MOS) indicating the quality of each individual
alignment.
Both scores range between one and zero.
CITING
Lassmann T, Sonnhammer EL. Kalign, Kalignvu and Mumsa: web servers for
multiple sequence alignment. Nucleic Acids Res. 2006 Jul 1;34(Web Server
issue): W596-9. doi: 10.1093/nar/gkl191.
PMID: 16845078; PMCID: PMC1538774