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- #!/bin/bash
- # Slackware build script for mrbayes
- # Copyright 2013-2021 Petar Petrov slackalaxy@gmail.com
- # All rights reserved.
- #
- # Redistribution and use of this script, with or without modification, is
- # permitted provided that the following conditions are met:
- #
- # 1. Redistributions of this script must retain the above copyright
- # notice, this list of conditions and the following disclaimer.
- #
- # THIS SOFTWARE IS PROVIDED BY THE AUTHOR "AS IS" AND ANY EXPRESS OR IMPLIED
- # WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
- # MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO
- # EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
- # SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
- # PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
- # OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
- # WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
- # OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
- # ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
- cd $(dirname $0) ; CWD=$(pwd)
- PRGNAM=mrbayes
- SRCNAM=MrBayes
- VERSION=${VERSION:-3.2.7a}
- BUILD=${BUILD:-1}
- TAG=${TAG:-_SBo}
- PKGTYPE=${PKGTYPE:-tgz}
- if [ -z "$ARCH" ]; then
- case "$( uname -m )" in
- i?86) ARCH=i586 ;;
- arm*) ARCH=arm ;;
- *) ARCH=$( uname -m ) ;;
- esac
- fi
- # If the variable PRINT_PACKAGE_NAME is set, then this script will report what
- # the name of the created package would be, and then exit. This information
- # could be useful to other scripts.
- if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
- echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
- exit 0
- fi
- TMP=${TMP:-/tmp/SBo}
- PKG=$TMP/package-$PRGNAM
- OUTPUT=${OUTPUT:-/tmp}
- if [ "$ARCH" = "i586" ]; then
- SLKCFLAGS="-O2 -march=i586 -mtune=i686"
- LIBDIRSUFFIX=""
- elif [ "$ARCH" = "i686" ]; then
- SLKCFLAGS="-O2 -march=i686 -mtune=i686"
- LIBDIRSUFFIX=""
- elif [ "$ARCH" = "x86_64" ]; then
- SLKCFLAGS="-O2 -fPIC"
- LIBDIRSUFFIX="64"
- else
- SLKCFLAGS="-O2"
- LIBDIRSUFFIX=""
- fi
- set -e
- rm -rf $PKG
- mkdir -p $TMP $PKG $OUTPUT
- cd $TMP
- rm -rf ${SRCNAM}-${VERSION}
- tar xvf $CWD/$SRCNAM-$VERSION.tar.gz
- cd ${SRCNAM}-${VERSION}
- chown -R root:root .
- find -L . \
- \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
- -o -perm 511 \) -exec chmod 755 {} \; -o \
- \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
- -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
- ./configure \
- --prefix=/usr \
- --libdir=/usr/lib${LIBDIRSUFFIX} \
- --sysconfdir=/etc \
- --localstatedir=/var \
- --mandir=/usr/man \
- --docdir=/usr/doc/$PRGNAM-$VERSION \
- --with-beagle=no \
- --build=$ARCH-slackware-linux
- # Fix the examples path
- sed -i "s:/share:/share/$PRGNAM:" examples/Makefile
- sed -i 's:examples/${PACKAGE}:examples:g' examples/Makefile
- # Use our CFLAGS
- sed -i "/^CFLAGS/s/=/+=/" Makefile
- make CFLAGS="$SLKCFLAGS"
- make install DESTDIR=$PKG
- # Rename the executable
- cd $PKG/usr/bin
- mv mb $PRGNAM
- cd -
- find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
- | cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
- # Add these too to the doc folder
- cp -a INSTALL TODO $PKG/usr/doc/$PRGNAM-$VERSION
- cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
- cat $CWD/References > $PKG/usr/doc/$PRGNAM-$VERSION/References
- mkdir -p $PKG/install
- cat $CWD/slack-desc > $PKG/install/slack-desc
- cd $PKG
- /sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
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