README 1.0 KB

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  1. BLAST+ Command Line Applications
  2. The NCBI Basic Local Alignment Search Tool (BLAST) finds regions of
  3. local similarity between sequences. The program compares nucleotide or
  4. protein sequences to sequence databases and calculates the statistical
  5. significance of matches. BLAST can be used to infer functional and
  6. evolutionary relationships between sequences as well as help identify
  7. members of gene families.
  8. BLAST+ is a new suite of BLAST tools that utilizes the NCBI C++
  9. Toolkit. The BLAST+ applications have a number of performance and
  10. feature improvements over the legacy BLAST applications (ncbi-blast).
  11. For details and citation, please see the BLAST+ user manual from the
  12. program's web site and the article in BMC Bioinformatics.
  13. This just repackages the binaries provided from upstream.
  14. NOTE ABOUT x86:
  15. Since version 2.2.31, NCBI does not provide 32-bit executables of
  16. BLAST+ for Linux. Their reasoning is that the limited memory and
  17. processing power of 32-bit systems is not suitable for the large
  18. databases searched by BLAST.