Pedro Mendes 454ba8c337 academic/copasi: Updated for version 4.16.104. 9 gadi atpakaļ
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README 9639f2f744 academic/copasi: Added (modeling/simulation of biochemical networks) 12 gadi atpakaļ
copasi.SlackBuild 454ba8c337 academic/copasi: Updated for version 4.16.104. 9 gadi atpakaļ
copasi.desktop 14c9325a87 academic/copasi: Updated for version 55. 11 gadi atpakaļ
copasi.info 454ba8c337 academic/copasi: Updated for version 4.16.104. 9 gadi atpakaļ
doinst.sh 9639f2f744 academic/copasi: Added (modeling/simulation of biochemical networks) 12 gadi atpakaļ
slack-desc 610e8461bb various: Fix slack-desc formatting and comment nit picks. 11 gadi atpakaļ

README

COPASI is a package for modeling and simulation of biochemical networks,
popular in the field of systems biology.

COPASI is a stand-alone program that simulates models of biochemical
networks using ODE solvers or Gillespie's stochastic simulation
algorithm. COPASI is compatible with models in SBML format. It also
performs several analyses, such as steady state, stability, parameter
sensitivity, elementary modes, Lyapunov exponents, optimization, and
parameter estimation. Data can be visualized in plots, histograms and
animations of network diagrams. COPASI's GUI is based on QT, but a
command line version is also included that allows for processing
computations in batch mode.

COPASI is a collaboration between research groups at the Virginia
Bioinformatics Institute, University of Heidelberg, University of
Manchester and previously in the EML-Research.