Fa:
67dec11b58
11.0
12.0
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15.0
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|---|---|---|
| .. | ||
| LICENSE | 1aa1d7bb19 academic/cap3: Added (DNA sequence assembly program). | 11 éve |
| README | 1aa1d7bb19 academic/cap3: Added (DNA sequence assembly program). | 11 éve |
| References | 1aa1d7bb19 academic/cap3: Added (DNA sequence assembly program). | 11 éve |
| cap3.SlackBuild | d0c108251a various: Update find command to match template. | 11 éve |
| cap3.info | 1aa1d7bb19 academic/cap3: Added (DNA sequence assembly program). | 11 éve |
| slack-desc | 1aa1d7bb19 academic/cap3: Added (DNA sequence assembly program). | 11 éve |
README
CAP3: A DNA sequence assembly program.
CAP3 if the third generation of the CAP sequence assembly program. The
program has a capability to clip 5' and 3' low-quality regions of reads.
It uses base quality values in computation of overlaps between reads,
construction of multiple sequence alignments of reads, and generation
of consensus sequences. The program also uses forward-reverse constraints
to correct assembly errors and link contigs.
This just repackages the binaries provided from upstream.
If you use CAP3 in any published work, please cite:
Huang, X. and Madan, A. (1999) CAP3: A DNA sequence assembly program.
Genome Res., 9, 868-877.
CAP3 if the third generation of the CAP sequence assembly program. The
program has a capability to clip 5' and 3' low-quality regions of reads.
It uses base quality values in computation of overlaps between reads,
construction of multiple sequence alignments of reads, and generation
of consensus sequences. The program also uses forward-reverse constraints
to correct assembly errors and link contigs.
This just repackages the binaries provided from upstream.
If you use CAP3 in any published work, please cite:
Huang, X. and Madan, A. (1999) CAP3: A DNA sequence assembly program.
Genome Res., 9, 868-877.