Tree:
67dec11b58
11.0
12.0
12.1
12.2
13.0
13.1
13.37
14.0
14.1
14.2
15.0
bedlam
bedlam-name-fixes
dive
erik
gitignore
libressl-gopher-test
master
misc-fixes
python-renames
rworkman
urchlay
user/aclemons/updates
user/anddt/development/acpica
user/anddt/development/glm
user/anddt/development/gnustep-base
user/anddt/development/gnustep-make
user/anddt/games/assaultcube-reloaded
user/anddt/games/doomseeker
user/anddt/games/prboom-plus
user/anddt/games/rocksndiamonds
user/anddt/games/rottexpr
user/anddt/games/srb2
user/anddt/graphics/blender
user/anddt/graphics/maim
user/anddt/ham/chirp
user/anddt/ham/hamlib
user/anddt/libraries/girara
user/anddt/libraries/goffice
user/anddt/libraries/gtksourceview4
user/anddt/libraries/imlib2
user/anddt/libraries/jsoncpp
user/anddt/libraries/libnova
user/anddt/libraries/libopenmpt
user/anddt/libraries/libtorrent
user/anddt/libraries/wxGTK3
user/anddt/libraries/xmlrpc-c
user/anddt/misc/discount
user/anddt/misc/slop
user/anddt/network/nethogs
user/anddt/network/putty
user/anddt/network/rclone
user/anddt/network/rtorrent
user/anddt/network/sshguard
user/anddt/network/strongswan
user/anddt/network/umurmur
user/anddt/network/yt-dlp
user/anddt/network/znc
user/anddt/office/gnumeric
user/anddt/office/sigil
user/anddt/system/FontAwesome
user/anddt/system/conky
user/anddt/system/fakeroot
user/anddt/system/hplip-plugin
user/anddt/system/postgresql
user/anddt/system/testdisk
user/anddt/system/worker
user/anddt/system/xen
user/anddt/system/zzzfm
user/belka/updates
user/chris.willing/updates
user/dslackw/updates
user/elyk/updates
user/kingbeowulf/updates
user/mario/updates
user/ponce/updates
user/pprkut/updates
willysr
wxWidgets-wip
GPG-KEY
15.0-20230325.1
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14.2-20190420.1
14.2-20190413.1
14.2-20190406.1
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14.2-20190119.1
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14.2-20181229.1
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14.2-20181222.1
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14.2-20181020.1
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14.2-20181006.1
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14.2-20180707.1
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dsomero
687c78d560
various: Fix SlackBuild formatting and comment nit picks.
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| README | e99cd4194e academic/amplicon: Added (Design PCR primers) | 13 years ago |
| References | edd24e87e7 academic/amplicon: Included the manual in the package | 12 years ago |
| amplicon.SlackBuild | 687c78d560 various: Fix SlackBuild formatting and comment nit picks. | 10 years ago |
| amplicon.desktop | e99cd4194e academic/amplicon: Added (Design PCR primers) | 13 years ago |
| amplicon.info | 4248415dde Add REQUIRED field to .info files. | 12 years ago |
| amplicon.png | e99cd4194e academic/amplicon: Added (Design PCR primers) | 13 years ago |
| doinst.sh | a11fe67bac Fix files with no newline at the end. | 12 years ago |
| slack-desc | 610e8461bb various: Fix slack-desc formatting and comment nit picks. | 10 years ago |
README
Amplicon is a tool for designing PCR primers where groups of related
DNA sequences can be assessed in aligned form. Other useful features
that are not common in other PCR primer design software are handling
of gapped sequences and degenerate sites in aligned DNA. Amplicon can
import aligned DNA sequences produced by Clustal, or aligned
sequences in MEGA or Fasta format.
For details and citation:
Jarman SN (2004) Amplicon: software for designing PCR primers on
aligned DNA sequences. Bioinformatics 20: 1644-1645.
DNA sequences can be assessed in aligned form. Other useful features
that are not common in other PCR primer design software are handling
of gapped sequences and degenerate sites in aligned DNA. Amplicon can
import aligned DNA sequences produced by Clustal, or aligned
sequences in MEGA or Fasta format.
For details and citation:
Jarman SN (2004) Amplicon: software for designing PCR primers on
aligned DNA sequences. Bioinformatics 20: 1644-1645.