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Petar Petrov
6074436888
academic/meme-db-motif: Updated for version 12.23.
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2 lat temu | |
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| README | 263e731a20 academic/meme-db-motif: Added (MEME Suite motif databases) | 4 lat temu |
| meme-db-motif.SlackBuild | 6074436888 academic/meme-db-motif: Updated for version 12.23. | 2 lat temu |
| meme-db-motif.info | 6074436888 academic/meme-db-motif: Updated for version 12.23. | 2 lat temu |
| slack-desc | 263e731a20 academic/meme-db-motif: Added (MEME Suite motif databases) | 4 lat temu |
README
Motif Databases (updated 28 Oct 2019) to be used with MEME Suite:
Eukaryote DNA (13 Databases)
Prokaryote DNA (4 Databases)
Methylcytosine DNA (1 Databases)
JASPAR (NON-REDUNDANT) DNA (21 Databases)
JASPAR (REDUNDANT) DNA (21 Databases)
JASPAR COLLECTIONS DNA (5 Databases)
TFBSshape DNA (3 Databases)
CIS-BP Single Species DNA (321 Databases)
ARABIDOPSIS (Arabidopsis thaliana) DNA (2 Databases)
ECOLI (Escherichia coli) DNA (2 Databases)
FLY (Drosophila melanogaster) DNA (6 Databases)
HUMAN (Homo sapiens) DNA (4 Databases)
MALARIA (Plasmodia falciparum) DNA (1 Databases)
MOUSE (Mus musculus) DNA (5 Databases)
WORM (Caenorhabditis elegans) DNA (1 Databases)
YEAST (Saccharomyces_cerevisiae) DNA (6 Databases)
CISBP-RNA Single Species RNA (268 Databases)
CISBP-RNA Single Species RNA (DNA-encoded) (268 Databases)
RNA (25 Databases)
RNA (DNA-encoded) (25 Databases)
miRBase Single Species microRNA (223 Databases)
miRBase Single Species microRNA (DNA-encoded) (223 Databases)
Protein Motifs (2 Databases)
Note!
The unarchived size of this is ~140 MB
Eukaryote DNA (13 Databases)
Prokaryote DNA (4 Databases)
Methylcytosine DNA (1 Databases)
JASPAR (NON-REDUNDANT) DNA (21 Databases)
JASPAR (REDUNDANT) DNA (21 Databases)
JASPAR COLLECTIONS DNA (5 Databases)
TFBSshape DNA (3 Databases)
CIS-BP Single Species DNA (321 Databases)
ARABIDOPSIS (Arabidopsis thaliana) DNA (2 Databases)
ECOLI (Escherichia coli) DNA (2 Databases)
FLY (Drosophila melanogaster) DNA (6 Databases)
HUMAN (Homo sapiens) DNA (4 Databases)
MALARIA (Plasmodia falciparum) DNA (1 Databases)
MOUSE (Mus musculus) DNA (5 Databases)
WORM (Caenorhabditis elegans) DNA (1 Databases)
YEAST (Saccharomyces_cerevisiae) DNA (6 Databases)
CISBP-RNA Single Species RNA (268 Databases)
CISBP-RNA Single Species RNA (DNA-encoded) (268 Databases)
RNA (25 Databases)
RNA (DNA-encoded) (25 Databases)
miRBase Single Species microRNA (223 Databases)
miRBase Single Species microRNA (DNA-encoded) (223 Databases)
Protein Motifs (2 Databases)
Note!
The unarchived size of this is ~140 MB