Träd:
331a473f1a
11.0
12.0
12.1
12.2
13.0
13.1
13.37
14.0
14.1
14.2
15.0
bedlam
bedlam-name-fixes
dive
erik
gitignore
libressl-gopher-test
master
misc-fixes
python-renames
rworkman
urchlay
user/aclemons/updates
user/anddt/development/acpica
user/anddt/development/glm
user/anddt/development/gnustep-base
user/anddt/development/gnustep-make
user/anddt/games/assaultcube-reloaded
user/anddt/games/doomseeker
user/anddt/games/prboom-plus
user/anddt/games/rocksndiamonds
user/anddt/games/rottexpr
user/anddt/games/srb2
user/anddt/graphics/blender
user/anddt/graphics/maim
user/anddt/ham/chirp
user/anddt/ham/hamlib
user/anddt/libraries/girara
user/anddt/libraries/goffice
user/anddt/libraries/gtksourceview4
user/anddt/libraries/imlib2
user/anddt/libraries/jsoncpp
user/anddt/libraries/libnova
user/anddt/libraries/libopenmpt
user/anddt/libraries/libtorrent
user/anddt/libraries/wxGTK3
user/anddt/libraries/xmlrpc-c
user/anddt/misc/discount
user/anddt/misc/slop
user/anddt/network/nethogs
user/anddt/network/putty
user/anddt/network/rclone
user/anddt/network/rtorrent
user/anddt/network/sshguard
user/anddt/network/strongswan
user/anddt/network/umurmur
user/anddt/network/yt-dlp
user/anddt/network/znc
user/anddt/office/gnumeric
user/anddt/office/sigil
user/anddt/system/FontAwesome
user/anddt/system/conky
user/anddt/system/fakeroot
user/anddt/system/hplip-plugin
user/anddt/system/postgresql
user/anddt/system/testdisk
user/anddt/system/worker
user/anddt/system/xen
user/anddt/system/zzzfm
user/belka/updates
user/chris.willing/updates
user/dslackw/updates
user/elyk/updates
user/kingbeowulf/updates
user/mario/updates
user/ponce/updates
user/pprkut/updates
willysr
wxWidgets-wip
GPG-KEY
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Andrew Clemons
7156a393b2
academic/TreeGraph: Use zulu-openjdk11.
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2 år sedan | |
|---|---|---|
| .. | ||
| README | 552e8af432 academic/TreeGraph: Added (A feature rich phylogenetic tree editor). | 6 år sedan |
| TreeGraph | 552e8af432 academic/TreeGraph: Added (A feature rich phylogenetic tree editor). | 6 år sedan |
| TreeGraph.SlackBuild | 63daf9f79a All: Support $PRINT_PACKAGE_NAME env var | 3 år sedan |
| TreeGraph.desktop | 552e8af432 academic/TreeGraph: Added (A feature rich phylogenetic tree editor). | 6 år sedan |
| TreeGraph.info | 7156a393b2 academic/TreeGraph: Use zulu-openjdk11. | 2 år sedan |
| TreeGraph.png | 552e8af432 academic/TreeGraph: Added (A feature rich phylogenetic tree editor). | 6 år sedan |
| doinst.sh | 552e8af432 academic/TreeGraph: Added (A feature rich phylogenetic tree editor). | 6 år sedan |
| slack-desc | 552e8af432 academic/TreeGraph: Added (A feature rich phylogenetic tree editor). | 6 år sedan |
README
TreeGraph (2): A feature rich and easy to use phylogenetic tree editor
TreeGraph (2) is a is graphical editor for phylogenetic trees, which
allows to apply various of graphical formats and edit operations and
supports several (visible or invisible) annotations attached to nodes
or branches. Data can be imported from many tree formats, tables and
BayesTraits output.
A key feature is the interactive comparison and combination of
alternative topologies from different analyses.
Key features
- Read trees in Newick, Nexus format (including annotations in hot
comments), NeXML or PhyloXML
- Import annotations from text files or combine information from
different phylogenetic analyses
- An unlimited number of numerical or textual annotations on every
branch
- Export trees to various vector and (anti-aliased) pixel graphic
formats (e.g. PDF, SVG, EMF or PNG)
- Many global and element specific formats like line width or color
and text formats
- Versatile editing and formatting options, such as automatically
setting branch widths or colors according to the value of any
attached data
- Editing operations like rerooting, ladderizing or moving and
collapsing nodes or copying or manually creating whole clades
- Generate commands and import data for ancestral state reconstruction
Citation
TreeGraph 2 has been published in BMC Bioinformatics:
Stöver BC, Müller KF: TreeGraph 2: Combining and visualizing evidence
from different phylogenetic analyses. BMC Bioinformatics 2010, 11:7
DOI: 10.1186/1471-2105-11-7
IMPORTANT NOTE ABOUT THE DOWNLOAD
If you have trouble with the download, please use a browser to visit
the TreeGraph download page at http://treegraph.bioinfweb.info/Download
and click the download link.
TreeGraph (2) is a is graphical editor for phylogenetic trees, which
allows to apply various of graphical formats and edit operations and
supports several (visible or invisible) annotations attached to nodes
or branches. Data can be imported from many tree formats, tables and
BayesTraits output.
A key feature is the interactive comparison and combination of
alternative topologies from different analyses.
Key features
- Read trees in Newick, Nexus format (including annotations in hot
comments), NeXML or PhyloXML
- Import annotations from text files or combine information from
different phylogenetic analyses
- An unlimited number of numerical or textual annotations on every
branch
- Export trees to various vector and (anti-aliased) pixel graphic
formats (e.g. PDF, SVG, EMF or PNG)
- Many global and element specific formats like line width or color
and text formats
- Versatile editing and formatting options, such as automatically
setting branch widths or colors according to the value of any
attached data
- Editing operations like rerooting, ladderizing or moving and
collapsing nodes or copying or manually creating whole clades
- Generate commands and import data for ancestral state reconstruction
Citation
TreeGraph 2 has been published in BMC Bioinformatics:
Stöver BC, Müller KF: TreeGraph 2: Combining and visualizing evidence
from different phylogenetic analyses. BMC Bioinformatics 2010, 11:7
DOI: 10.1186/1471-2105-11-7
IMPORTANT NOTE ABOUT THE DOWNLOAD
If you have trouble with the download, please use a browser to visit
the TreeGraph download page at http://treegraph.bioinfweb.info/Download
and click the download link.