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1a80a96741
11.0
12.0
12.1
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bedlam
bedlam-name-fixes
dive
erik
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python-renames
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urchlay
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user/anddt/misc/discount
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user/anddt/network/sshguard
user/anddt/network/strongswan
user/anddt/network/umurmur
user/anddt/network/yt-dlp
user/anddt/network/znc
user/anddt/office/gnumeric
user/anddt/office/sigil
user/anddt/system/FontAwesome
user/anddt/system/conky
user/anddt/system/fakeroot
user/anddt/system/hplip-plugin
user/anddt/system/postgresql
user/anddt/system/testdisk
user/anddt/system/worker
user/anddt/system/xen
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user/chris.willing/updates
user/dslackw/updates
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user/kingbeowulf/updates
user/mario/updates
user/ponce/updates
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willysr
wxWidgets-wip
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Heinz Wiesinger
63daf9f79a
All: Support $PRINT_PACKAGE_NAME env var
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| README | 58816c2740 academic/aline: update README | 3 vuotta sitten |
| References | a536adc58e academic/aline: Added (Tk graphical interface for Perl) | 11 vuotta sitten |
| aline.SlackBuild | 63daf9f79a All: Support $PRINT_PACKAGE_NAME env var | 3 vuotta sitten |
| aline.desktop | a536adc58e academic/aline: Added (Tk graphical interface for Perl) | 11 vuotta sitten |
| aline.info | ec514e32c4 Multiple: update email, year and slack-desc | 8 vuotta sitten |
| aline.png | a536adc58e academic/aline: Added (Tk graphical interface for Perl) | 11 vuotta sitten |
| doinst.sh | a536adc58e academic/aline: Added (Tk graphical interface for Perl) | 11 vuotta sitten |
| slack-desc | ec514e32c4 Multiple: update email, year and slack-desc | 8 vuotta sitten |
README
Aline: An Extensible WYSIWYG Protein Sequence Alignment Editor for
Publication Quality Figures.
Aline is an interactive perl/tk application which can read common
sequence alignment formats which the user can then alter, embellish,
markup etc to produce the kind of sequence figure commonly found in
biochemical articles.
NOTE
The default row length is 100 residues. If you want to change that to
something else (e.g. 1000) pass ROW=1000 to the script.
OPTIONAL
Although not needed for running Aline, clustalw and mkDSSP are
desirable for its complete functionality. A third tool is CHAINSAW,
part of the CCP4 suite (http://www.ccp4.ac.uk/). Visit the web site
for more information and installation instructions if you want it.
CITING
Bond, C.S. and Schuttelkopf, A.W. (2009), Acta cryst. D65, 510-512
https://crystal.scb.uwa.edu.au/charlie/software/aline/actad_65_510.pdf
Publication Quality Figures.
Aline is an interactive perl/tk application which can read common
sequence alignment formats which the user can then alter, embellish,
markup etc to produce the kind of sequence figure commonly found in
biochemical articles.
NOTE
The default row length is 100 residues. If you want to change that to
something else (e.g. 1000) pass ROW=1000 to the script.
OPTIONAL
Although not needed for running Aline, clustalw and mkDSSP are
desirable for its complete functionality. A third tool is CHAINSAW,
part of the CCP4 suite (http://www.ccp4.ac.uk/). Visit the web site
for more information and installation instructions if you want it.
CITING
Bond, C.S. and Schuttelkopf, A.W. (2009), Acta cryst. D65, 510-512
https://crystal.scb.uwa.edu.au/charlie/software/aline/actad_65_510.pdf