Branch:
14.1
11.0
12.0
12.1
12.2
13.0
13.1
13.37
14.0
14.1
14.2
15.0
bedlam
bedlam-name-fixes
dive
erik
gitignore
libressl-gopher-test
master
misc-fixes
python-renames
rworkman
urchlay
user/aclemons/updates
user/anddt/development/acpica
user/anddt/development/glm
user/anddt/development/gnustep-base
user/anddt/development/gnustep-make
user/anddt/games/assaultcube-reloaded
user/anddt/games/doomseeker
user/anddt/games/prboom-plus
user/anddt/games/rocksndiamonds
user/anddt/games/rottexpr
user/anddt/games/srb2
user/anddt/graphics/blender
user/anddt/graphics/maim
user/anddt/ham/chirp
user/anddt/ham/hamlib
user/anddt/libraries/girara
user/anddt/libraries/goffice
user/anddt/libraries/gtksourceview4
user/anddt/libraries/imlib2
user/anddt/libraries/jsoncpp
user/anddt/libraries/libnova
user/anddt/libraries/libopenmpt
user/anddt/libraries/libtorrent
user/anddt/libraries/wxGTK3
user/anddt/libraries/xmlrpc-c
user/anddt/misc/discount
user/anddt/misc/slop
user/anddt/network/nethogs
user/anddt/network/putty
user/anddt/network/rclone
user/anddt/network/rtorrent
user/anddt/network/sshguard
user/anddt/network/strongswan
user/anddt/network/umurmur
user/anddt/network/yt-dlp
user/anddt/network/znc
user/anddt/office/gnumeric
user/anddt/office/sigil
user/anddt/system/FontAwesome
user/anddt/system/conky
user/anddt/system/fakeroot
user/anddt/system/hplip-plugin
user/anddt/system/postgresql
user/anddt/system/testdisk
user/anddt/system/worker
user/anddt/system/xen
user/anddt/system/zzzfm
user/belka/updates
user/chris.willing/updates
user/dslackw/updates
user/elyk/updates
user/kingbeowulf/updates
user/mario/updates
user/ponce/updates
user/pprkut/updates
willysr
wxWidgets-wip
GPG-KEY
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Petar Petrov
bb0faef860
academic/spades: Updated for version 3.6.1.
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8 years ago | |
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| .. | ||
| README | bb0faef860 academic/spades: Updated for version 3.6.1. | 8 years ago |
| References | 3f04be71a0 academic/spades: Added (SPAdes Genome Assembler). | 9 years ago |
| slack-desc | 3f04be71a0 academic/spades: Added (SPAdes Genome Assembler). | 9 years ago |
| spades.SlackBuild | bb0faef860 academic/spades: Updated for version 3.6.1. | 8 years ago |
| spades.info | bb0faef860 academic/spades: Updated for version 3.6.1. | 8 years ago |
README
SPAdes: a single-cell genome assembler
SPAdes (St. Petersburg genome assembler) is intended for both standard
isolates and single-cell MDA bacteria assemblies.
SPAdes generates single-cell assemblies, providing information about
genomes of uncultivatable bacteria that vastly exceeds what may be
obtained via traditional metagenomics studies.
Citing:
Nurk S et al. Assembling Single-Cell Genomes and Mini-Metagenomes From
Chimeric MDA Products. Journal of Computational Biology 20(10) (2013),
714-737. doi:10.1089/cmb.2013.0084
NOTE: This will not build on a 32bit system.
SPAdes (St. Petersburg genome assembler) is intended for both standard
isolates and single-cell MDA bacteria assemblies.
SPAdes generates single-cell assemblies, providing information about
genomes of uncultivatable bacteria that vastly exceeds what may be
obtained via traditional metagenomics studies.
Citing:
Nurk S et al. Assembling Single-Cell Genomes and Mini-Metagenomes From
Chimeric MDA Products. Journal of Computational Biology 20(10) (2013),
714-737. doi:10.1089/cmb.2013.0084
NOTE: This will not build on a 32bit system.